| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0002 |
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| Symbol | |
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| ID | 3579553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 2800 |
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| End bp | 3942 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637683682 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_288065 |
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| Protein GI | 161723112 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000143991 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTTCC GGGTCGAACG CGACGTGCTC GCAGACGCCG TCGCCTGGAC CGCTCGTACT
CTGCCGGTCC GTCCGTCGGT GCCCGTCCTC GCTGGAATGC TGCTGGACGC CGACGACGTG
GACGGACACC AGCGGCTCAC CCTGTCCAGC TTCGACTACG AGGTCTCCGC CCAGGTATCG
GTCGACGTCG ATATCGACGA ACCGGGACGG ATCCTCGTGT CGGGCAAGCT GCTCGCCGAG
ATCGTGCGCA ACCTTCCTCC ACAGACTGTG GAAGTCAGCA CTGACGGGGC CAAAGTCGTC
GTCTCCTGCG GCAGCGCGAA GTTCACGATC CTCACCCTCC CTGTGGAGGA CTACCCGACC
CTCCCCGCCA TGCCGGCGCT GACCGGATCC GTGCTCAGCG ACACCTTCGC TGCTGCCGTC
AGCCAGGTGG CCGTCGCCGC CGGACGCGAC GACACCCTGC CCATGCTCAC CGGGGTGCGC
ATCGAGATCG AAGGCTCCAC CGTGACCCTC GTCTCCACCG ACCGCTACCG GCTGGCGGTC
CGGGAACTCA CCTGGACCCC CGAGGACCCC AACGTGTCCG CGGTCGCCCT CGTCCCCGCC
AAAACCCTCG CCGACACCGC CAAGTCGCTC ACCGGCGGCG CCCAGATCTC CATCGCCCTG
TCCACCGCGG AGAACGGCGG CGAAGGCATG ATCGGCTTCG AAGGCGGCGG CCGACGCACC
ACCACCCGGC TCCTGGAAGG GGAGTTCCCC AAGTACCGGA AACTCCTCCC GGAGTCCTTC
AACTCGGTGG CAGAAGTCCA GAAGAACGAG TTCATCGAAG CCGTCAAACG CGTCTCGCTG
GTCGCGGAAC GCAACACGCC GCTGCGGCTG TCCTTCACCA GCGACCGCCT GGTGCTCGAA
GCCGGCACCG GAGAAGAAGC CCAGGCTGTG GAGGAACTCA GCGCCACCCT GGAAGGCGAC
GACATCCAGA TCGCCTTCAA CTCCACCTTC CTGCTCGACG GGCTCAACGC GATCGAATCA
GACGTGGCCC ACCTGCAGTT CACGACCTCC ACCAAACCGG CCATCATCAC CGGCAAGCCC
GCAGACGACG GCACCGCCTC GGACTACCGG TACCTGATCA TGCCTGTGCG GATCTCCAAC
TGA
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| Protein sequence | MKFRVERDVL ADAVAWTART LPVRPSVPVL AGMLLDADDV DGHQRLTLSS FDYEVSAQVS
VDVDIDEPGR ILVSGKLLAE IVRNLPPQTV EVSTDGAKVV VSCGSAKFTI LTLPVEDYPT
LPAMPALTGS VLSDTFAAAV SQVAVAAGRD DTLPMLTGVR IEIEGSTVTL VSTDRYRLAV
RELTWTPEDP NVSAVALVPA KTLADTAKSL TGGAQISIAL STAENGGEGM IGFEGGGRRT
TTRLLEGEFP KYRKLLPESF NSVAEVQKNE FIEAVKRVSL VAERNTPLRL SFTSDRLVLE
AGTGEEAQAV EELSATLEGD DIQIAFNSTF LLDGLNAIES DVAHLQFTTS TKPAIITGKP
ADDGTASDYR YLIMPVRISN
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