Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_2236 |
Symbol | |
ID | 5877121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | - |
Start bp | 2238473 |
End bp | 2239156 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641542589 |
Product | lipopolysaccharide biosynthesis protein |
Protein accession | YP_001663841 |
Protein GI | 167040856 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3944] Capsular polysaccharide biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAG AGGAAATTGA TTTGCGAGAA ATTTTCCTGA TTATAAGAAA AAGGACAAAA ATGATAGTAA TTATTACCCT TTTAGCTACG ATAATTAGTG GGATATTTTC ATATTTCATT GCTACTCCTG TGTATAAAGC GAGTACTTCT TTGATAGTCA GCAGAACACA AAGTTCCGCG CTTAACAATA GTCAGATACA AGTTCAAGAT ATACAAACTA GTAGGATGCT AGCTGCCACT TATAGTGAAT TTGTTAAAAG CAGGAGGGTT TTGCAGCCAG TAATTGAGAG ACTGAGACTA CCTCTAACTG TTGACCAATT AAAAAATAGT GTAGATGTAG CAGCTAAAGG TAACACAGAG ATTATTGAGA TAAGCGTAAA AAATAGTGAC CCTCGTAAAG CAGCAGAAAT AGCAAATGCG ATTGCGGATT CATTTGTGGA AAACATTGTA AAAATAATGA ACATTGATAA TGTGCAAGTA ATTGATAAAG CTATTCCACC AACCTCTAAA ATTAGTCCTA AAACAAGTTT GAATATTGCG GTAGCTGCTA TTTTAGGCTT TATGATAAGC GTCTTTATTG TATTTTTATT GGAATATATG GATAGAACTA TAAAAAGCCC AGAAGATATA AAGAAATACT TGGACTTACC TGTATTAGGT GTCATTCCCG AAATAAAAAA TTAA
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Protein sequence | MAEEEIDLRE IFLIIRKRTK MIVIITLLAT IISGIFSYFI ATPVYKASTS LIVSRTQSSA LNNSQIQVQD IQTSRMLAAT YSEFVKSRRV LQPVIERLRL PLTVDQLKNS VDVAAKGNTE IIEISVKNSD PRKAAEIANA IADSFVENIV KIMNIDNVQV IDKAIPPTSK ISPKTSLNIA VAAILGFMIS VFIVFLLEYM DRTIKSPEDI KKYLDLPVLG VIPEIKN
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