| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1506 |
|---|
| Symbol | |
|---|
| ID | 5876958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | + |
|---|
| Start bp | 1538369 |
|---|
| End bp | 1539580 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641541854 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_001663129 |
|---|
| Protein GI | 167040144 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1459] Type II secretory pathway, component PulF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000781072 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTGT ATGCTTATAG GGCAAGGGAT ATGGGAGGAA ATCTCGTTAC AGGGACTTTG
GAAGTTGACT CAAAATCTCA GTGTATTGAC ATTTTAAAAC AGAGAAATTA TTATATAATC
GACATACAAG AAGAGATAGT CAAACAAGAC ATACTCGATT TTAGTTCTTT TAAAAAGGTC
AAAGTAAAAG ATATTGCGGT CTTCTGTCGG CAGTTTGCCA CTCTGATAAA TGCAGGGATT
CCTATAGTGA CCTCTTTGGT TACTATGAGA GAACAAGTGG AGAATAAAAG ACTGAAAAAT
GCTTTGAGAG AGGTGTACGA AGAAGTTCAA AAAGGAAGGA CTCTTTCTGA TGCTATGAAA
AGGCACAGTG ATGTTTTTCC TATGCTTTTA TATAATATGG TGGAAGTGGG GGAAGTAAGC
GGTACTTTAG ATAAAGTGAT GAATGAAATG GCAGAACACT ATGAAAAAGA GAATGAATTA
AATCAGAAAA TAAAGTCTGC CCTTACATAT CCTGTAATTG TGTCAATCGT AGCGATTTTG
GTGGTTATAT TTCTCTTGAC AAATGTTTTG CCTATTTTTG TGGGGATGTT TGAAAATGCA
GGTGTACAGC TGCCACTGCC TACAAGGATT CTCCTCGCTA TAAGCGGTTC TATATCTAAA
TATTGGTATT TTTACATAGG AGTAATTTTG GTGATTTCTT ATTCGATTTC GAGTTTTTTA
AAGACACCTC AAGGAAGGTG CATTTATGAC AGAATGCTTT TAAACATGCC AATCTTTGCC
CCTTTAAACA AAAAGATTTT AATTTCCAGG TTTACAAGGA CTTTAGGAAC ATTGATAAGT
GCTGGTGTAC CGCTTATGAA GGCAATGGAA GTAGTAGAAA AAGTTGTGGG TAATACAGTA
GTAGCAGAGG GACTTAAAAA AGCGCAAGAC GATATAAAAA AAGGCTTACC CCTTTCAGAA
CCTCTAAAAA GAATTGGCAT TTTCCCGCCA ATGGTGATTC AGATGATAGG TATTGGTGAA
AGTTCAGGTT CATTGGACAG CATATTAAAT AAAACTGCTG ATTTTTATGA CGGAGAAGTG
GATACAGCCG TGTCACAAAT GACAACTCTA TTAGAACCAT TAATAATTGT TATGCTGGCA
ACAGTAGTGG GATTTATAGT TATCTCAATA ATTATGCCAC TCTTTGAATT ATACAATTTT
ATAGGCCAGT GA
|
|---|
| Protein sequence | MPLYAYRARD MGGNLVTGTL EVDSKSQCID ILKQRNYYII DIQEEIVKQD ILDFSSFKKV
KVKDIAVFCR QFATLINAGI PIVTSLVTMR EQVENKRLKN ALREVYEEVQ KGRTLSDAMK
RHSDVFPMLL YNMVEVGEVS GTLDKVMNEM AEHYEKENEL NQKIKSALTY PVIVSIVAIL
VVIFLLTNVL PIFVGMFENA GVQLPLPTRI LLAISGSISK YWYFYIGVIL VISYSISSFL
KTPQGRCIYD RMLLNMPIFA PLNKKILISR FTRTLGTLIS AGVPLMKAME VVEKVVGNTV
VAEGLKKAQD DIKKGLPLSE PLKRIGIFPP MVIQMIGIGE SSGSLDSILN KTADFYDGEV
DTAVSQMTTL LEPLIIVMLA TVVGFIVISI IMPLFELYNF IGQ
|
|---|
| |