| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1504 |
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| Symbol | |
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| ID | 5876956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | + |
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| Start bp | 1535627 |
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| End bp | 1537303 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641541852 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001663127 |
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| Protein GI | 167040142 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT
[TIGR02533] general secretory pathway protein E
[TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGA AAAAGCTAGG GGAGCTTTTA CTTGAGGTAG GGCTTATAAC AGAAGAACAA
TTAAAGCACG CAATAGAAGT TCAAAACAAA ACAGGAGAAA AGTTAGGAAA AGTTCTTATT
AAATTGGGGT ATGTTACAGA AAGCCAAATA CTAGAGGCTT TAGAATTTCA ATTAGGTATT
CCACATGTAG ATTTGCAAAA ATACTATATT GATCCCGATG TAGCAAAATT AATTCCTGAA
GCCGTTGCTA AAAGACATAC TATTATTCCT ATAAAAAAAG ATGAAGATGG TATATTGGTA
GCAATGGCAG ACCCTCTGAA TATTTTTGCA CTAGATGATG TGAGAATCAT TACGAAACAA
AATGTAAAGC CTTTAATTGC TTCTGAAGGA AGCATCTTAA AAGCCATAGA TAGAATTTAC
GGAAGAGAAC AGGCAGAAAA AGCAGTACAG GATTTTAAAA AGGAGTTTCA AAGTGAAAGT
CAAGAAGAGC TGCCAGATGA GATTCTTGAA GAAGTACAAA ACGCGCCTGC TGTACGCTTT
GTAAATTCTA TAATTGAGCA GGCAATAAAA AATAGGGCTT CAGATATTCA CATTGAACCT
ACTGAAAAAG ACCTTAGAAT TCGATTTAGG ATAGATGGAC AATTAACAGA AGCTATGAGG
ACTATAAAAA GTACCCATGC CCCTGTTGTG ACAAGAGTAA AAATTATGGC TAATATGAAC
ATCGCTGAAA GAAGACTTCC TCAAGATGGC AGATTTGATT TTACTACAGG TGGTAAAAAT
ATTGACATAA GAGTTTCTTC GTTGCCCACT GTTTTTGGAG AGAAATTGGT ATTGAGGCTT
TTAGACAAGG AAAATTTTAT AATGACAAAG GAGCAATTAG GTTTTGAAGA AGAGGATCTG
GTGCTCTTTG ATAAACTTAT CAAAAGGCCT AATGGCATTG TGCTTTTGAC TGGTCCTACA
GGTAGTGGGA AAACCACCAC TCTTTATGCA ATGCTGAGAG AGCTTAACAA ACCCAATATT
AATATAATAA CTGTTGAGGA CCCTGTTGAG TATTCCCTTG AGGGAATAAA CCAGGTACAA
GTTAATGAAA AGGCAGGCCT TACCTTTGCG ACTGCTCTTA GGTCAATTTT GAGGCAAGAC
CCTGATATAA TTATGATTGG AGAAATTAGA GATACTGAAA CTGCTGAGAT AGCTATTCGC
TCTGCCATAA CAGGGCACTT AGTCCTTTCC ACTTTGCATA CAAATGATGC GGCGGGAGCG
GTGACTAGGC TTGTAGATAT GGGTATAGAG CCTTATCTTG TGTCTTCTTC TGTAGTAGGG
GTTATTGCTC AGAGATTGGC GAGAAAAATA TGTGATAACT GTAGAATTTC TTATAAAGCT
TCCAAAGGCG AAAAAGAGCT ATTGGGAATT TCAGAAAATG AAGACATTAC TTTATACAAG
GGGAGAGGGT GCCCTGTTTG TAATAAAACA GGCTATAGGG GAAGAATTCC TATATATGAG
ATAATGACTG TTACTTCTGA TATTAGAGAG CTTATAAATG CTAAGGTTTC CTCTGATGTT
ATTGGAGCTC AGGCTGTAAA AAATGGCATG AAAACTTTAC GAGAAAGTGC TAAAAGACTT
GTATTACAAG GAAAAACTAC AATTGATGAA ATGATAAGAC TAACTTACGA GGAATGA
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| Protein sequence | MAKKKLGELL LEVGLITEEQ LKHAIEVQNK TGEKLGKVLI KLGYVTESQI LEALEFQLGI
PHVDLQKYYI DPDVAKLIPE AVAKRHTIIP IKKDEDGILV AMADPLNIFA LDDVRIITKQ
NVKPLIASEG SILKAIDRIY GREQAEKAVQ DFKKEFQSES QEELPDEILE EVQNAPAVRF
VNSIIEQAIK NRASDIHIEP TEKDLRIRFR IDGQLTEAMR TIKSTHAPVV TRVKIMANMN
IAERRLPQDG RFDFTTGGKN IDIRVSSLPT VFGEKLVLRL LDKENFIMTK EQLGFEEEDL
VLFDKLIKRP NGIVLLTGPT GSGKTTTLYA MLRELNKPNI NIITVEDPVE YSLEGINQVQ
VNEKAGLTFA TALRSILRQD PDIIMIGEIR DTETAEIAIR SAITGHLVLS TLHTNDAAGA
VTRLVDMGIE PYLVSSSVVG VIAQRLARKI CDNCRISYKA SKGEKELLGI SENEDITLYK
GRGCPVCNKT GYRGRIPIYE IMTVTSDIRE LINAKVSSDV IGAQAVKNGM KTLRESAKRL
VLQGKTTIDE MIRLTYEE
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