Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_1503 |
Symbol | |
ID | 5877564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 1534659 |
End bp | 1535513 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641541851 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001663126 |
Protein GI | 167040141 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATTA ATTCAAATAC TAAACTGTAT GGTCTTATAG GGCATCCTGT AGAACATAGT TTATCCCCTT TAATACATAA CTATGCTTTT AAGTCTTTAA ATTTAAATTG TGTCTACACT GTTTTTGATG TTTTGCCAGA AAAGCTTGAA GATGCAGTAA ATGGAGTAAA AGCTTTGGGA ATAAAAGGAG TTAATGTGAC TGTGCCACAT AAAGAGAAGA TAATTAAATA CTTAGATGTG GTTTCAGAAG AAGCTTTAAA AATTGGCGCA GTCAATACTG TAGTCAATGA AGAAGGAATA TTAAAAGGCT ATAATACGGA TGTCTATGGC TTTATAGACT CATTAACAGA AGTAGGAGAA AAAATTGAAG GAAGAAAAGC TGTTGTCTTA GGAGCTGGTG GAGCTTCTAA AGCTGTTTGT GTCGCCCTTG CTCTAAAAGG GATAGATTCG ATAATAATTG CCAATAGAAG TGTTGAGAGA GCAAAAGATT TGTCAGAGTA CATTAAAAAA GAATTTAAGA TTCAGTGTGA TTACTGCAGT ATAAATGAAG TAAAAGAACT ACCAGAAATA GATATACTTG TTAATACTAC AAGCGTAGGA ATGTATCCAA ATACAGAAGA TTCTCCTGCT GATGAAAAAG TGGTTTTGAA AGCTAAATTT GTCTATGACC TTATTTACAA TCCTTTTGAA ACTGCTCTTT TAAAACATGC GAAAAAGAAT GGAATAAAGT ATTCTAATGG ACTTTCTATG TTGGTAAATC AAGCTAATTA TTCTTTCAAA TTATGGACAG GGGGATTTTT CGACAAAAAT TTGGTATACA GGTATTTAAA AGAAGGAATT ACGCATAATT TGTAG
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Protein sequence | MEINSNTKLY GLIGHPVEHS LSPLIHNYAF KSLNLNCVYT VFDVLPEKLE DAVNGVKALG IKGVNVTVPH KEKIIKYLDV VSEEALKIGA VNTVVNEEGI LKGYNTDVYG FIDSLTEVGE KIEGRKAVVL GAGGASKAVC VALALKGIDS IIIANRSVER AKDLSEYIKK EFKIQCDYCS INEVKELPEI DILVNTTSVG MYPNTEDSPA DEKVVLKAKF VYDLIYNPFE TALLKHAKKN GIKYSNGLSM LVNQANYSFK LWTGGFFDKN LVYRYLKEGI THNL
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