Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_1354 |
Symbol | smpB |
ID | 5877665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 1392216 |
End bp | 1392686 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641541703 |
Product | SsrA-binding protein |
Protein accession | YP_001662980 |
Protein GI | 167039995 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000258997 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGAAGG AAGAAATTAA AATAATCGCT CAAAACAAAA AAGCTTACCA TGATTACTTC ATTGAAGAAA CTTATGAAGC AGGAATAGTG CTTAGTGGAA CTGAAGTTAA ATCTATTAGG ATGGGGAAAG TCAATTTAAA AGATAGCTTT GCAAGAGTTG AAAACAACGA AGTTTATCTT TATAATATGC ATATAAGTCC TTATGAAAAA GGCAATATAT TTAATAAAGA CCCCTTAAGG ACTAGAAAAT TACTTCTCAA TAGACATGAG ATTAATAAAC TAATTGGTTA TGTGACAAGG AAGGGTTACA CTTTAATTCC TACAAAGCTT TATTTAAAGC GAGGCCTTGT CAAAGTCGAA TTAGCTGTAG CGAGAGGTAA AAAACTCTAC GATAAGAGAG AAGATATTGC GAGAAGAGAT GCAAAAAGAG AATTAGAAAA ACACTTTAAA GAAAAACAAT TAGGCATATA A
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Protein sequence | MAKEEIKIIA QNKKAYHDYF IEETYEAGIV LSGTEVKSIR MGKVNLKDSF ARVENNEVYL YNMHISPYEK GNIFNKDPLR TRKLLLNRHE INKLIGYVTR KGYTLIPTKL YLKRGLVKVE LAVARGKKLY DKREDIARRD AKRELEKHFK EKQLGI
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