| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1314 |
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| Symbol | |
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| ID | 5876007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | + |
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| Start bp | 1352111 |
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| End bp | 1353184 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641541662 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_001662942 |
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| Protein GI | 167039957 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000145678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACG AAGAATTGTC TAAAGAAGCC ATTACAGAAC TTATCAATAA AGGAAAAAAA
ACTGGGATGC TCACCTACAA TGAGATAATG GATTCTTTAG AAGATATTGA TTTAAATCCT
GACCAAATTG AGAAAGTATA TGATGCTTTT GAAGACATGG GAATTGAAAT TGTTGGGGAA
GAACCTCGTC AGGAAGAAAT AACTGAAGAA GATTTAGATT TAGACCTTTC TCTTCCTGAA
GGAATCAGTA TAGATGACCC TGTTAGAATG TATTTGAAGG AGATAGGCAA GATTCCCCTT
CTCACTCCTG AAGAAGAGAT TGAATTGGCA AAAAGAATCG AACAAGGAGA CGAAGAAGCT
AAAAAAAGAC TTATAGAAGC TAATTTGAGA TTGGTTGTAA GCATAGCCAA AAGATACGTA
GGAAGAGGAA TGCTTTTCTT AGATTTGATA CAAGAAGGAA ATTTGGGGTT ACTCAAAGCA
GTTGAAAAAT TTGACTATAG AAAAGGCTAT AAATTTAGTA CTTACGCTAC ATGGTGGATA
AGACAGGCTA TTACAAGAGC TATTGCAGAT CAAGCAAGAA CCATAAGAAT CCCTGTACAC
ATGGTAGAAA CTATCAATAA ATTGATAAGA GTCCAAAGGC AATTGCTGCA GGAATTAGGT
CGTGAGCCCA CTCCTGAAGA GTTGGCAAAA GAGATGGGGA TGCCAGAAGA AAAAGTAAGA
GAGATAATGA AAATAGCACA AGAACCTGTA TCTTTAGAAA CTCCTATTGG GGAAGAGGAA
GACAGCCACT TAGGCGATTT TATACCCGAT GAAGATGCAC CAGCTCCAGC AGAAGCTGCT
GCTTTTACAA TGCTAAAAGA ACAGTTGATG GATGTTCTTG ATACCCTAAC GCCAAGGGAA
GAGAAAGTAC TAAGACTTAG GTTTGGCCTA GATGACGGTC GAGCAAGAAC TTTAGAGGAA
GTAGGAAAAG AGTTTAATGT TACAAGAGAA CGCATAAGGC AAATTGAAGC AAAGGCTTTG
AGAAAATTGA GGCATCCCAG CAGGAGCAAA AAATTAAAAG ATTTCCTTGA TTGA
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| Protein sequence | MNNEELSKEA ITELINKGKK TGMLTYNEIM DSLEDIDLNP DQIEKVYDAF EDMGIEIVGE
EPRQEEITEE DLDLDLSLPE GISIDDPVRM YLKEIGKIPL LTPEEEIELA KRIEQGDEEA
KKRLIEANLR LVVSIAKRYV GRGMLFLDLI QEGNLGLLKA VEKFDYRKGY KFSTYATWWI
RQAITRAIAD QARTIRIPVH MVETINKLIR VQRQLLQELG REPTPEELAK EMGMPEEKVR
EIMKIAQEPV SLETPIGEEE DSHLGDFIPD EDAPAPAEAA AFTMLKEQLM DVLDTLTPRE
EKVLRLRFGL DDGRARTLEE VGKEFNVTRE RIRQIEAKAL RKLRHPSRSK KLKDFLD
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