| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0892 |
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| Symbol | rpsM |
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| ID | 5877926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | + |
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| Start bp | 917071 |
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| End bp | 917439 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641541237 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001662530 |
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| Protein GI | 167039545 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000337976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGAGAA TTGCAGGCGT TGACTTGCCA AGAGATAAAC GAGTTGAAAT CGCTTTGACA
TATATATATG GAATTGGCCG TTCTCGTTCA AATGAGATAC TTGCTAAAGC AGGTGTAAAT
CCAGACACAA GAGTCAAGGA TTTAACAGAA GAAGAAGTTT CTAGATTGAG AGAAATAATT
GATAAAGAAT ACAAAGTTGA AGGCGACTTA AGAAAAGAAG TTGCCATGAA TATCAAAAGA
TTAATGGATA TAGGATGCTA TAGAGGAATA AGGCACAAAA GAGGTTTACC CGTAAGAGGT
CAAAGAACAA GGACTAATGC TAGAACGAGA AAAGGTCCAA GGAAAACTGT TGCTAAGAAG
AAGAAGTAA
|
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| Protein sequence | MARIAGVDLP RDKRVEIALT YIYGIGRSRS NEILAKAGVN PDTRVKDLTE EEVSRLREII
DKEYKVEGDL RKEVAMNIKR LMDIGCYRGI RHKRGLPVRG QRTRTNARTR KGPRKTVAKK
KK
|
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