| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0860 |
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| Symbol | |
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| ID | 5877942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | + |
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| Start bp | 896513 |
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| End bp | 899986 |
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| Gene Length | 3474 bp |
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| Protein Length | 1157 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641541205 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_001662498 |
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| Protein GI | 167039513 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000858214 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAGC CTGAAACTAT AAATTATAGA ACGTTAAAAC CAGAAAGAGA TGGCCTTTTT
TGTGAAAGAA TTTTTGGACC TACAAAAGAC TGGGAATGCC ATTGCGGTAA ATACAAAAGA
GTAAGATACA AAGGTGTGGT TTGTGATAGA TGCGGTGTAG AAGTGACAAG GTCTAAAGTT
AGAAGGGAAA GGATGGGGCA CATTGAACTT GCTGCTCCTG TTGCCCATAT ATGGTATGTA
AAGGGGATTC CTAGTCGAAT GGGGCTTCTT CTTGACATGT CTCCGAGAGC ATTAGAAAAA
GTGCTGTACT TTGTATCATA TGTGGTTATT GACCCGGGTG ATACTCCTCT TACTAAAAAG
CAGTTATTGT CAGAGAAAGA GTACAGAGAA TATTTGGATA AATATGGCAA TAAATTTAGA
GCAGGAATGG GAGCAGAAGC TATAAAAGAA TTGTTACAAG AAATAGATTT AGAAAAGTTG
AGCAAAGAAT TGAAAGCTGA AATACGTGAA TCTACTGGTC AAAAAAGGGT AAGAGCAATT
AGAAGGTTAG AAGTAGTGCA AGCTTTTATA GATTCAGGCA ATCGCCCTGA ATGGATGATT
TTAGATGTTA TACCGGTAAT TCCACCTGAT TTAAGACCTA TGGTGCAGTT GGATGGTGGG
CGGTTTGCAA CTTCAGACCT TAATGATTTG TACAGGAGAG TAATCAATAG AAATAACAGA
TTGAAAAAGC TTTTAGACTT AGGGGCTCCG GATATTATAG TAAGAAATGA AAAAAGAATG
CTACAAGAAG CAGTAGATGC TTTGATAGAC AACGGAAGGA GAGGAAGGCC TGTTACAGGT
CCCGGCAACA GACCTTTAAA ATCCCTTTCT GATATGCTAA AAGGTAAGCA AGGAAGATTC
AGACAAAATC TTTTAGGTAA GAGGGTAGAC TATTCAGGCC GTTCCGTTAT AGTAGTAGGA
CCAGAGCTTA AAGTTTATCA ATGTGGCTTG CCAAAAGAAA TGGCATTAGA GCTTTTTAAG
CCTTTTGTAA TGAAGAAATT AGTAGATGAA GGTTTGGCGC AGCATATAAA AAGTGCTAAG
AGAATGGTTG AAAAGATAAA GCCGGAGGTA TGGGATGTAT TAGAGGAAGT TATTAAAGAA
CATCCCGTAT TGTTAAACAG AGCGCCTACC CTCCATAGAT TGGGTATTCA AGCTTTTGAA
CCGGTGTTAG TTGAAGGAAG AGCTATAAAG CTTCATCCCC TTGTGTGTAC AGCTTACAAT
GCAGACTTTG ATGGTGACCA GATGGCTGTC CACGTACCTC TTTCAATGGA AGCACAAGCT
GAAGCGAGGT TTTTGATGCT AGCTGCTAAT AACATACTCA AGCCCCAAGA TGGAAAACCT
GTTATGACTC CTACTCAAGA TATGGTATTA GGTTGTTATT ACTTAACAGC AGATGAAGAG
GGAGTTCAGG GTGAGGGCAA ATATTTCTCT AGCCCTGAAG AAGCTATTAC GGCATATCAA
CTGGGATACA TTCACATTCA TGCTAAGATA AAAGTGAAAA TGACAAAAGA AATTGATGGA
GTCAAAAAAT CAAAAATAAT TGAGACAACA GTTGGAAAAA TTATATTTAA TGAAGCAATT
CCGCAGGATT TAGGTTATGT AGATAGAACT AATCCTGAAA CTGCTTTTGA CTTAGAAATT
AATGATTTAG TAGATAAATC TAAATTGGGG AAAATTTTAG ATAGAGTATA CAGATTACAC
GGGCCAACAA AAACCGCAGA AACTCTTGAT AAAATCAAAG AGTTAGGTTT CAGATATTCT
ACAAAAGCAG CTATCACTGT CAGTGTTTCT GACATGGTAA TACCTAAAGA AAAAGAGAAG
CTTCTAAAAG AAGCAGATGA AATGGTAAGT AAAATTGAAA GCCAATTCAG ACGTGGTCTC
ATATCCGAGG AAGAGAGATA TGAGAGCATA ATAAGAACAT GGAATATGAC TACAGAAAAA
GTTACAGAAG CTTTAATGAC AAGCCTGGAC AAATTTAATC CTATATTTAT GATGGCTCAT
TCAGGAGCAA GAGGAAGTAA AAACCAGATA AGGCAGTTAG CGGGTATGAG AGGTCTTATG
GCAGACCCTT CAGGAAGAAT TATTGAGCTT CCTATAAGGT CTAACTTTAG AGAGGGTCTT
AATGTGTTGG AATTCTTCAT ATCTACTCAC GGTGCAAGAA AAGGTCTTGC GGATACAGCT
TTAAGAACTG CAGACTCTGG TTATTTAACA AGAAGATTAG TTGATGTTAG CCAAGATGTA
ATAGTCAGAG AAGAAGATTG TGGAACAGAT GAGGGAATTT ACGTAGAAGA AATAAGAGAA
GGAAACGAAA TAATTGAAAG ATTAGCTGAC AGAATAATAG GAAGAGTTGC GGCTGAAGAT
GTGGTTGATA ATGAAGGCAA GATAATTGTC AGAAGAAATG AATTGATAAA CGAAGAGGAA
GCAGAAAAAA TCGAAAAAGC AGGTATTACT AAGGTAAAGA TAAGGTCACT TTTGACATGT
AAGTCACGAC ACGGCGTATG TAGAATGTGT TATGGTAGAG ACCTTGCAAC AGGTGAACTT
GTAAATATAG GCGAAGCAGT GGGCATTATT GCTGCACAAG CTATAGGCGA ACCAGGTACA
CAGCTTACCA TGAGAACATT CCATACTGGC GGTGTAGCAG GTTCTGATAT TACACAAGGT
CTTCCAAGAG TAGAAGAGCT TTTTGAGGCG AGAAAACCAA AAGGACTTGC TGTAATTTCT
GAAATTTCTG GTGTTGTAAG AATCAATGAA TCAAAGAAGA GAAGAGAAGT CATTGTAACA
GATGAAGAAA ACAGTATTTC TAAGACTTAT CTGATTCCCT ATGGTTCAAG ACTTAAAGTT
CATGATGGTC AGGTAATACA AGCTGGGGAT GAGCTGACAG AAGGGTCTGT AAATCCTCAT
GACCTTTTGA AAATAAAAGG AATATTTGCA GTACAGACTT ACTTGCTACA AGAGGTTCAA
AAGGTTTATA GATTGCAGGG TGTTGAAATA AATGATAAGC ACATTGAAGT AATAATAAGA
CAAATGATGA GAAAAGTAAA AGTAGAAGAC CCAGGAGATA CTTCAATGCT TCCTGGAGAG
CTTATAGATA TGTTTAAATT CGAAGAGGAA AACAAAAAAG CAGTAGAAAA AGGACTAAAA
CCTGCTACTG GTAGGAGAGC TCTTTTGGGA ATTACAAAGG CGGCTTTGGC AACAGATTCT
TTCTTATCAG CTGCTTCTTT CCAAGAGACA ACAAGAGTGC TTACAGATGC AGCTATAAAA
GGTAAAGTAG ATCCGCTTTT GGGATTGAAA GAAAATGTGA TAATAGGTAA ACTAATTCCT
GCTGGAACTG GCTTATCACG CTACAGAAAT ATTTCCGTTG TAAAGAAAGT AAAAGACCAA
CAGGATGCAC AAGATAAAGA AAAAGAAGAA GCAGAAGTAA AGGCAAGCAA CTAA
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| Protein sequence | MKKPETINYR TLKPERDGLF CERIFGPTKD WECHCGKYKR VRYKGVVCDR CGVEVTRSKV
RRERMGHIEL AAPVAHIWYV KGIPSRMGLL LDMSPRALEK VLYFVSYVVI DPGDTPLTKK
QLLSEKEYRE YLDKYGNKFR AGMGAEAIKE LLQEIDLEKL SKELKAEIRE STGQKRVRAI
RRLEVVQAFI DSGNRPEWMI LDVIPVIPPD LRPMVQLDGG RFATSDLNDL YRRVINRNNR
LKKLLDLGAP DIIVRNEKRM LQEAVDALID NGRRGRPVTG PGNRPLKSLS DMLKGKQGRF
RQNLLGKRVD YSGRSVIVVG PELKVYQCGL PKEMALELFK PFVMKKLVDE GLAQHIKSAK
RMVEKIKPEV WDVLEEVIKE HPVLLNRAPT LHRLGIQAFE PVLVEGRAIK LHPLVCTAYN
ADFDGDQMAV HVPLSMEAQA EARFLMLAAN NILKPQDGKP VMTPTQDMVL GCYYLTADEE
GVQGEGKYFS SPEEAITAYQ LGYIHIHAKI KVKMTKEIDG VKKSKIIETT VGKIIFNEAI
PQDLGYVDRT NPETAFDLEI NDLVDKSKLG KILDRVYRLH GPTKTAETLD KIKELGFRYS
TKAAITVSVS DMVIPKEKEK LLKEADEMVS KIESQFRRGL ISEEERYESI IRTWNMTTEK
VTEALMTSLD KFNPIFMMAH SGARGSKNQI RQLAGMRGLM ADPSGRIIEL PIRSNFREGL
NVLEFFISTH GARKGLADTA LRTADSGYLT RRLVDVSQDV IVREEDCGTD EGIYVEEIRE
GNEIIERLAD RIIGRVAAED VVDNEGKIIV RRNELINEEE AEKIEKAGIT KVKIRSLLTC
KSRHGVCRMC YGRDLATGEL VNIGEAVGII AAQAIGEPGT QLTMRTFHTG GVAGSDITQG
LPRVEELFEA RKPKGLAVIS EISGVVRINE SKKRREVIVT DEENSISKTY LIPYGSRLKV
HDGQVIQAGD ELTEGSVNPH DLLKIKGIFA VQTYLLQEVQ KVYRLQGVEI NDKHIEVIIR
QMMRKVKVED PGDTSMLPGE LIDMFKFEEE NKKAVEKGLK PATGRRALLG ITKAALATDS
FLSAASFQET TRVLTDAAIK GKVDPLLGLK ENVIIGKLIP AGTGLSRYRN ISVVKKVKDQ
QDAQDKEKEE AEVKASN
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