| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0553 |
|---|
| Symbol | |
|---|
| ID | 5877053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | + |
|---|
| Start bp | 573859 |
|---|
| End bp | 574359 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641540889 |
|---|
| Product | phosphodiesterase |
|---|
| Protein accession | YP_001662197 |
|---|
| Protein GI | 167039212 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0622] Predicted phosphoesterase |
|---|
| TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.279938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTAG CAGTTATTAG CGACACACAT GGTATATTTG CGCTGGTTAG AAAAAAATTG
CGGGAGCTTA AAGGAATAGA TTATCTTATT CATTTAGGAG ATAATGCTTC AGATGCTATT
CAATTATCTC AAGAGTTTGG GATTCCATTA GAGTATGTTA AAGGGAATTG TGATTTCCCT
ACAAAAGATG AATTGGAGAA AGTAATTGAA ACAGAAGGCC AAAAAATCTT GTTAACTCAT
GGACACAGAT ATTATGTTAA ATACGAGTAT CAAACGATTT TAGATAGAGG AAGAGAATTG
GGAGTAAATG CTGTATTTTT TGGGCATACT CATATTCCTA TGATTTCAAA ACATGAAGAT
ATTTTACTTT TAAATCCAGG CAGTCCTTCT TTGCCAAGAG AAGGTGCAAA AAAAACTATA
GCATTAGTGA CAATTGATAA GACTGGTATA TTCCCAAGAT TAGTGAATTT AGAAGAAGTC
TCAGTGCTAA AAGAAGCATA G
|
|---|
| Protein sequence | MVLAVISDTH GIFALVRKKL RELKGIDYLI HLGDNASDAI QLSQEFGIPL EYVKGNCDFP
TKDELEKVIE TEGQKILLTH GHRYYVKYEY QTILDRGREL GVNAVFFGHT HIPMISKHED
ILLLNPGSPS LPREGAKKTI ALVTIDKTGI FPRLVNLEEV SVLKEA
|
|---|
| |