Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_0498 |
Symbol | |
ID | 5877237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 512059 |
End bp | 512769 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641540835 |
Product | LytTR family two component transcriptional regulator |
Protein accession | YP_001662144 |
Protein GI | 167039159 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00022884 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAAGAA TAGTTATTGC AGAAGACGAT ATAAATTTTA AAAAAGAACT CATAAAAATT CTTTTAACAA TGGAAGGCGT AAGTGTTGAA TATTCTACAG GAGACGGAAA TGACGCATTA GAAGCATTAA TTAAAATTAA ACCGGACGTT GCTATTTTAG ATATAGGATT ACCAGGAATA TCGGGCATTG AGGTGGCGAA AAAGATTAGA GAATACATGC CTTTTTTGGA AATAATTTTT ATTACGTCCT TTGAGGAATA CATAAAAGAT GCTGTGAGAC TTTATGCTTC TGATTATATT GAGAAGCCTC TTGATGAGAA GAGGCTGAGA GAAACTTTGG ATAGGATAAA GAAAAAACTT TTGGAAGTAG AAAATGTCAT CCCTTTTAAG ACGGAAGATG GAGTAAAGCT TATCAATCCA AAGGAAATTT ATTGTGTTCA AGCCAGTAAA AAAAGGAGCA TAGTTTATAC CCAAAAAGAA AAATTTATAT GTGATTATTC TTTAAAAGAA ATAGAGGAAT TGTTAGATAG TAGCATGTTT TTTAGAACAA ATCGATCTTT TCTAGTGAAC CTCTTTAAAG TTGAGCTGTT GAAAGATAAC AATAGGACTT CCTTTGAGAT ACGTCTTAAA GGTTCAAATT ATAAGGCTTA TCTCTCTAAA GAATTGTATG AAGAATTTAG GAGGAGAGTA AAAGCTATTT ACAAATCATA G
|
Protein sequence | MLRIVIAEDD INFKKELIKI LLTMEGVSVE YSTGDGNDAL EALIKIKPDV AILDIGLPGI SGIEVAKKIR EYMPFLEIIF ITSFEEYIKD AVRLYASDYI EKPLDEKRLR ETLDRIKKKL LEVENVIPFK TEDGVKLINP KEIYCVQASK KRSIVYTQKE KFICDYSLKE IEELLDSSMF FRTNRSFLVN LFKVELLKDN NRTSFEIRLK GSNYKAYLSK ELYEEFRRRV KAIYKS
|
| |