| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0378 |
|---|
| Symbol | |
|---|
| ID | 5877596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | + |
|---|
| Start bp | 385850 |
|---|
| End bp | 386833 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641540714 |
|---|
| Product | peptidase M42 family protein |
|---|
| Protein accession | YP_001662026 |
|---|
| Protein GI | 167039041 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1363] Cellulase M and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTAA ATATAGAATT GATAAAAAAA CTTACACAAA CTTATGGACC CTCAGGAAAT
GAGGATAAAG TGCTTGAAAT TATAAAAGCG GAAGTAAAGG ATTTTTGTGA TGATATAACT
TATGACGCTT TGGGAAATAT GATATGCAAA AAAGCTGGAA AAGGAAAAAA GATAATGGTA
GCTGCTCATA CGGATGAAAT AGGGCTTATG GTTACACACA TAGAAGATGA GGGTTTCTTA
AGGTTTACTA CTATAGGGGG AGTTTTTGTA GAGCAGACAA TAGGAAGAAG AGTAATTTTT
AAAAATGGAG TGCAAGGAGT TATAGGAGTA GAGCATTTAG AGGATAAAAA AGAGATAAAG
ACTGAAAAGT TGTATATAGA CATTGGAGCG AAAAATAAAG AAGAGGCTCA AAAATATGTA
AATATAGGTG ATAGTGCCGC ATTTGCCGGT GAGTTTATTG AATCAGGAGA TAGGCTTATC
TCAAAAGCAT TTGATGATAG AATAGGCTGT TATGTGGCAA TTGAGGTATT GAAAAATCTT
AAGACAAAAA ATGAGGTATA TTTTGTTTTT ACTGTTCAAG AAGAAGTTGG AACAAGAGGT
GCAGCTGCAG CTGCCTATAA CATACATCCA GATTTTGCTG TAGCAGTTGA TGTTACATCA
ACTGGCGATA CACCTAAAGC GAAAAAGATG GCAGTCTCTC TTGGTAAAGG GGCAGCTATA
AAAGTGATGG ACAGGTCAAT AATAGTAAGC CCTTCTGTGA GGGAGATGAT GATTGAAATA
GCTCAAAAAC ACAACATCCC TTATCAGCTG GAAATACTTG AATTTGGTGG AACTGATGCA
GGGCCTATAC ATTTGACAAA AGGCGGTATA CCAGCTGGTG TCATATCAAT TCCGACAAGG
TACGTCCACA GCGTATCAGA AATGGTAGAT AAAAATGACG TTGAGGCAAG CATTGAACTT
TTGAAAAAAG TTCTTGAGAA ATGA
|
|---|
| Protein sequence | MSLNIELIKK LTQTYGPSGN EDKVLEIIKA EVKDFCDDIT YDALGNMICK KAGKGKKIMV
AAHTDEIGLM VTHIEDEGFL RFTTIGGVFV EQTIGRRVIF KNGVQGVIGV EHLEDKKEIK
TEKLYIDIGA KNKEEAQKYV NIGDSAAFAG EFIESGDRLI SKAFDDRIGC YVAIEVLKNL
KTKNEVYFVF TVQEEVGTRG AAAAAYNIHP DFAVAVDVTS TGDTPKAKKM AVSLGKGAAI
KVMDRSIIVS PSVREMMIEI AQKHNIPYQL EILEFGGTDA GPIHLTKGGI PAGVISIPTR
YVHSVSEMVD KNDVEASIEL LKKVLEK
|
|---|
| |