Gene Tery_4993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4993 
Symbol 
ID4246648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7635217 
End bp7636134 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content38% 
IMG OID638109804 
Productphosphonate ABC transporter, periplasmic phosphonate-binding protein 
Protein accessionYP_724380 
Protein GI113478319 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGAC GTAATTTTTT GTATGCCTCA CTGCTTACTC TATCTTTTGC AGTTATTTCA 
TGTAATCAAA GTATTTCTGA TAATCAAACA GCTAGTTCAA CCAATACTAC AGACTCCCGT
TCCGAATTAA TAATGGGGTT AATTCCGGCG GAGAGTAACG AGGAAATGGT GGAAAAGTTT
GAGCCGATGC GGGCCTACAT GGAAAAGAAA CTAAATCGTC CCATAAAAGT TTTTACTGCT
ACTGACTATG CCGGTGTGAT TGAAGCAATG CGGCAAGATA AAGTTGATAT TGCTTGGTTT
GGTCCTCTAT CATATGTATT GGCGGAACAA GAAGCTGGAG CAGAAGCATT TGCTACTGGA
GTTCGTACAA AAACTGGTAA ATCTACATAT AAAAGTATAT TAGTTGTTCC AGGAGATTCC
ACTGTTCAAT CAATTCAGGA TTTAAAAGGA AAAAATGTAG CATTTGTTGA TCCTGCATCT
ACTTCAGGTG GGTTAGTTCC CTCTTACTTA GTGTTAAAAG CAACGGGTCA AAAGCCAAAA
GATTTCTTTG GTAAGCTTAC CTATGCAGGT TCTCATGATG CAGCAGGAAT GGCTGTAAAA
AATCAAACTG TAGATGCAGC AGGTACTAAT GATATTACTT ATAACAAAAT GATCAACAAG
GGACTAATTT CCGAAGAGAG TAATCGTATT TTGTTGGAAT CAGAACCAAT ACCAGGTTCA
CCTTTAGCTT ATCGTCAGGA ATTAGATGAG CAAACAAAGA ATAATATTCG TGAGACAGTG
TTAAATGCTC ATAAAGATAT TAAAGTGACT GGTTATGGGG ATCTTTTGAA TTATGAATCT
GCCACTCCCA AAGACTACGG GGTTGTCCGC GATATGATTA ATACCCTGGG AATCGGTCGT
GAGGAAATCC TCAAGTAA
 
Protein sequence
MLRRNFLYAS LLTLSFAVIS CNQSISDNQT ASSTNTTDSR SELIMGLIPA ESNEEMVEKF 
EPMRAYMEKK LNRPIKVFTA TDYAGVIEAM RQDKVDIAWF GPLSYVLAEQ EAGAEAFATG
VRTKTGKSTY KSILVVPGDS TVQSIQDLKG KNVAFVDPAS TSGGLVPSYL VLKATGQKPK
DFFGKLTYAG SHDAAGMAVK NQTVDAAGTN DITYNKMINK GLISEESNRI LLESEPIPGS
PLAYRQELDE QTKNNIRETV LNAHKDIKVT GYGDLLNYES ATPKDYGVVR DMINTLGIGR
EEILK