| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4783 |
|---|
| Symbol | |
|---|
| ID | 4246437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 7350004 |
|---|
| End bp | 7350819 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638109632 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_724208 |
|---|
| Protein GI | 113478147 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1912] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.167261 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGATA AAAAAATCAT CACACTCTTA ACTGATTTTG GATTAAAAGA TGTCTATGTA
GGTGTAATGA AGGGTATAAT TGCTCAAATT AACCCTCATT TAAAAGTCAT CGACCTGACT
CATCAAATTC CTCCTCAAAA TTTATTTGCT GCTAGATTTT GTTTGCTAAA TGCTTATCCT
TATTTTCCTT CAGAAACAGT TCATCTTGCT GTTGTGGATC CGGGAGTTGG GAGTAGAAGA
AAAGCGATCG CTATTCAACT ACCCAATGGT TTTTTAGTTG GACCTGACAA TGGTATTTTT
AGTGGAATTT TGGAAAATTT TGAAATACAA AATATCCAGG TAGTTACCCT TACTAATTCT
GAGTATTGGC ACACAGATAA ACCTAGTGTA ACTTTTCACG GCCGAGATAT ATTTGCTCCT
GTTGCTGCTC ATATTAGTAG TGGGGTGAGG TTAGAAAATT TGGGAGAAAA AATTAATCCA
GAAAGTTTAG TGAAATTACC TTTAAATAAT ATTAATTTCA CGGATTCAGG TCTTGCAGGT
TGGATTCAGC ATATTGACCA TTTTGGCAAT ATAATTACTA ATATTTCTAG AAGTTATATT
ATAGAAAAAA ATTGGTTCCT TGTTGTTAAT AATAATGCGG ATTTTTCACC TGGTAAAATC
ATCTCTAGTG GTTATACTTA TGCTGATTGT AAACTAGGGG AGTTAATTGC AATTATTGGC
TCTCATGGTT TTGTCGAAAT TGCTGCTAAT GGTGGTAGTG CTGGGGAGCA ACTTAATTTA
AAGTATGGGG ATAAAGTTGA AGTTCGTTGG TTTTAA
|
|---|
| Protein sequence | MSDKKIITLL TDFGLKDVYV GVMKGIIAQI NPHLKVIDLT HQIPPQNLFA ARFCLLNAYP
YFPSETVHLA VVDPGVGSRR KAIAIQLPNG FLVGPDNGIF SGILENFEIQ NIQVVTLTNS
EYWHTDKPSV TFHGRDIFAP VAAHISSGVR LENLGEKINP ESLVKLPLNN INFTDSGLAG
WIQHIDHFGN IITNISRSYI IEKNWFLVVN NNADFSPGKI ISSGYTYADC KLGELIAIIG
SHGFVEIAAN GGSAGEQLNL KYGDKVEVRW F
|
|---|
| |