| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4774 |
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| Symbol | trmE |
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| ID | 4246428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 7336544 |
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| End bp | 7337947 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638109624 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_724200 |
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| Protein GI | 113478139 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.149576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGATAA CTGAAATGAC TCCTAGAAAT ACTATTGCCG CGATCGCTAC TGCTATTGTT
CCCCAACAAG GAAGTGTGGG GATAGTCCGA ATGTCTGGTT CTGAGGCGAT GAAAATTGCT
CAAACCCTAT TTCATGCACC GGGGAAGCAA GTTTGGGAGA CTCACCATAT TCTTTATGGC
TATATCCGTC ATCCCCACAC TGGGCAATTA GTAGATGAAA CTTTATTATT GATTATGAAA
GCTCCTCGTT CTTATACCCG TGAGGATGTG GTAGAATTCC ATTGTCATGG TGGAATTATT
GCGATACAAC AAGTATTACA ATTATGTATT GAGGCAGGGG CAGAGCTAGC TCAACCAGGA
GAGTTTACTT TACGGGCTTT CTTAAATGGA CGATTGGATC TGACTCAAGC TGAAAGTATT
GCAGAACTCG TAGGTTCTCA ATCTCCCGCT GCTGCTCAAG TTGCTTTAGC TGGTTTGCAG
GGTAAGTTAG CTAGTCCAAT TCGTCACTTA AGAGCTTGTT GTCTAGATAT TTTAGCAGAA
ATAGAGGCAC GCATTGATTT TGAGGAAGAT TTACCTCCTT TGGATGAATC TGAAATTAGT
CAAAAACTGG ATGATATTTT GGTGGATTTG TCAATGGTAT TAGCTACAGC AAGTCGGGGA
GAGTTATTAC GTACTGGTTT AAAGGTCGCT ATTATCGGAC GTCCGAATGT GGGCAAGTCG
AGTTTGTTAA ATGCTTGGAG TCATAGCGAT CGCGCTATTG TTACCGATCT TCCTGGTACA
ACCAGGGATG TAGTTGAATC TCAGTTGGTG GTAGGTGGTA TTCCGGTTCA GGTTTTAGAT
ACAGCCGGTA TTCGGGAAAC TGAGGATCGG GTAGAAAAAA TTGGGGTAGA GCGATCGTGT
CAGGCAGCTG AGTCTGCTGA CATTGTTTTA TTGACGATTG ACGCTCAGGT TGGTTGGACG
GAGTTAGATG AAGTTATTTA TCAACAGGTC AAACATCGTT TTTTAATTTT GATAATTAAT
AAAGTTGATC AAGTTGATTT GGTTCATTCA GAATTAATTA GGTCAATTTT TTACCCAGAA
ACTATTAAAA ATGTTGTGGC TACAGCCGCT ATTAATAATC AAGGAATTGA GGAACTGGAA
GCAGCAATTC TTAATGCTGT AAATTTAGAT AATGTGCAGC CAGAAAATTT AGATTTTGCA
GTTAATCAAA GGCAAGCAGC AGCTTTAACT AGAGCTAAGA TAGCTTTGGA GCAATGTTTA
AATACTATTA AAAATAACTT ACCTTTAGAT TTTTGGACAA TCGACTTAAG GGGAAGCATT
TATGCTTTGG GAGAGGTTAC GGGAGAGGAT GTAACGGAAT CTGTTTTGGA TATAATTTTT
AGTCGCTTTT GTATTGGGAA GTAA
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| Protein sequence | MVITEMTPRN TIAAIATAIV PQQGSVGIVR MSGSEAMKIA QTLFHAPGKQ VWETHHILYG
YIRHPHTGQL VDETLLLIMK APRSYTREDV VEFHCHGGII AIQQVLQLCI EAGAELAQPG
EFTLRAFLNG RLDLTQAESI AELVGSQSPA AAQVALAGLQ GKLASPIRHL RACCLDILAE
IEARIDFEED LPPLDESEIS QKLDDILVDL SMVLATASRG ELLRTGLKVA IIGRPNVGKS
SLLNAWSHSD RAIVTDLPGT TRDVVESQLV VGGIPVQVLD TAGIRETEDR VEKIGVERSC
QAAESADIVL LTIDAQVGWT ELDEVIYQQV KHRFLILIIN KVDQVDLVHS ELIRSIFYPE
TIKNVVATAA INNQGIEELE AAILNAVNLD NVQPENLDFA VNQRQAAALT RAKIALEQCL
NTIKNNLPLD FWTIDLRGSI YALGEVTGED VTESVLDIIF SRFCIGK
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