Gene Tery_4701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4701 
Symbol 
ID4246355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7224827 
End bp7225120 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content43% 
IMG OID638109561 
ProductRNA-binding region RNP-1 
Protein accessionYP_724137 
Protein GI113478076 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000966249 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.61972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATTT ATGTAGGTAA CTTATCCTAC GATGTCACAC AAGAGGACTT ATCTGAGGTT 
TTTGCAGAAT ATGGTACTGT CAAGAGGGTT CAGTTACCAA CTGATCGAGA AACAGGACGT
CCCCGTGGCT TTGGATTTGT AGAAATGAGC AGTGAAGAAG AAGAACAGAA AGCTATTGAT
GCACTTGATA GTGCTGAATG GATGGGTCGT GATATAAAGG TTAATAAGGC TAAGCCTCGT
GAAGAACGTA AACCAAGCAA TCGAAGGGAT CCCGGTGCCG GTGGAAGATA TTAA
 
Protein sequence
MSIYVGNLSY DVTQEDLSEV FAEYGTVKRV QLPTDRETGR PRGFGFVEMS SEEEEQKAID 
ALDSAEWMGR DIKVNKAKPR EERKPSNRRD PGAGGRY