| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4635 |
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| Symbol | secA |
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| ID | 4246289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 7125754 |
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| End bp | 7128564 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638109504 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_724080 |
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| Protein GI | 113478019 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.226506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAA AACTTCTGGG AGACCCCAAC GCACGCAAAC TCAAGAAATT TCAACCTTGG
GTAACAGATA TTAATATTCT TGAAGAAGAT ATTCAAAAAC TTTCAGATGA AGAACTCAAG
GCTAAAACAG GAGAATTTAG ACAAGCTCTA GAAAAAGCAA AAACTAAGGA TGAAGAAAAA
GCAATATTAG AAGAAATTCT ACCGGAAGCT TTTGCAGTGG TTCGAGAAGC AGGAAAACGA
GTCCTAAGTA TGCGACACTT TGATGTCCAA CTATTGGGGG GCATTATTTT ACATCAAGGC
CAAATAGCAG AAATGAAAAC TGGGGAGGGT AAAACTCTTG TTGCTACTTT ACCAGCATAC
TTAAATGGTC TAACAGGTAA AGGTGTCCAT GTAATTACTG TTAATGACTA CCTAGCAAGA
CGGGATGCGG AATGGATGGG ACAAGTACAT CGTTTTCTAG GTTTAAGTGT AGGGTTAATT
CAACAGGGTA TGAATCCAGA AGAACGGAAA AAAAATTATA CCTGTGATAT TACTTATGCT
ACTAACAGCG AAGTTGGATT TGACTACTTG CGTGATAATA TGGCAACTAA TATGGAGGAA
GTAGTACAAC GTCCATTTAA TTTTTGCATT ATTGACGAAG TTGACTCAGT ATTAGTAGAT
GAGGCAAGGA CTCCTTTAAT TATTTCTGGG CAGGTAGAAA GGCCAAGTGA AAAGTATATC
AAAGCAGCAG AAATTGCAGC AGCTTTAAGT AAAGAAAAAG AACATTATGA AGTAGATGAA
AAAGCCAGAA ATGTTCTATT GAGTGATGAG GGTTTTGCTG AAGCAGAACA ATTATTGGCA
GTACAAGATT TATATAACCC TGAAGACCCT TGGGCCCATT TTGTATTTAA TGCTTTGAAG
GCAAAGGAAT TATTTATCAA AGATGTTAAC TATATTGTCC GAGATGATGA AGTAGTTATT
GTTGATGAAT TTACTGGTAG GGTAATGCCT GGGCGACGAT GGAGTGATGG TCTACATCAG
GCGATCGAGG CGAAAGAAAG GGTGGATATT CAGCCAGAAA CCCAAACCCT GGCAACTATT
ACTTATCAGA ATTTCTTTCT ACTTTATCCG AAGTTATCGG GAATGACAGG AACGGCAAAA
ACAGAAGAAG CAGAATTTGA AAAGATTTAT AATTTACAAG TAACAATTAT ACCCACGAAT
AAACCAACTG GTAGAAAAGA TTTATCAGAT GTAGTTTATA AAACAGAAGT AGGAAAATGG
AAGTCTATCG CTCAAGAATG TGCAGAAATG CATAAAGAAG GTCGTCCAGT GTTAGTAGGT
ACAACGAGTG TAGAAAAATC AGAGTTACTA TCTAGGTTAC TAGGTGAGGG GAAAATTCCC
CACCAACTTT TGAATGCTAA ACCAGAAAAT GTGGAGCGTG AATCAGAAAT TGTCGCACAA
GCAGGTCGTG GCGGTGCAGT CACTATTGCC ACGAATATGG CAGGTCGAGG TACAGATATT
ATTTTGGGTG GAAATGCTGA GTACATGGCA AAGTTGAAAT TACGGGAGTA TCTAATGCCT
AAAGTTGTGA AACCAGAAGA TGATGATGGT TTGGGTATGG TAAGAGTATC AGGACTGAAA
AAGTCTCATG TAGCAAAAGG TTTTGATCCC CAGCAAAAGG TGAAGACCTG GAAAGTTTCA
CCTCAGATAT TTCCAGTTAA GCTATCACAA GAAACGGAGG GAATGTTGAA GCTAGCAGTA
AATTTGGCAG TTAAAGAGTG GGGAGAGAGA GCGCTGCCTG AGTTGGTGGT GGAAGATAAG
GTGGCGATCG CTGCGGAAAA AGCTCCGACT ACTGAACCAG TTATTGAAAA GTTGCGGGAA
GTTTATAACT TAATTCGGCA AGAATATGAA AACTACATAG AGAGAGAACA TAACCAAGTA
GTGGGATGTG GTGGATTGCA CGTTATTGGT ACTGAGCGCC ACGAGTCACG CCGCATTGAT
AATCAGTTAC GGGGAAGAGC GGGGCGACAA GGGGACCCAG GTTCGACTAG ATTTTTCTTG
AGTTTGGAAG ATAACTTATT AAGGATTTTT GGTGGCGATC GCGTTGCTGG AATGATGCAG
GCGTTTGGGG TTGAGGAAGA TATGCCAATT GAGTCTGGGT TGTTAACTCG TTCTCTCGAA
GGTGCCCAAA AGAAGGTGGA AACTTATTAT TACGATATGC GTAAGCAGGT GTTTGAGTAT
GATGAAGTGA TGAATAATCA ACGTCGAGCA ATTTATGCGG AACGTCGGCG GGTATTGGAA
GGTAGAGATT TGAAGGAGCA GGTGATTAAG TATGCGGAGC AAACGATGGA TGATATTGTG
GAGGCGTATA TTAATCCTGA GTTACCTTCG GAAGAGTGGG AGTTGGATAA GTTGGTAGAG
AAGGTGAAGC AGTTTGTTTA CTTGTTGGCA GATTTAACCC CTGAGCAATT GTTTGATTTG
TCGATGGAAG ATATTAGGAC TTTTATGCAT GAACAGGTAA GGAATGCTTA TGATATTAAG
GAAGCACAGG TAAATCAGAT TCGTGGTGGT TTGATGCGAG ATGCGGAACG TTTCTTTATT
TTGCAGCAAA TTGATACTTT GTGGCGGGAG CATTTACAGC AGATGGATGC GTTACGGGAG
TCTGTTGGTT TACGGGGTTA TGGACAGAAA GATCCGTTGA TAGAGTATAA GAGTGAGGGT
TATGAGTTGT TCTTGGATAT GATGACGGAT ATTCGCCGAA ATGTGGTTTA TTCTTTGTTC
CAATTCCAAC CGCAACCTGC TGTACAGACT ACTGCTGCAG AGACGGTTTA G
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| Protein sequence | MFKKLLGDPN ARKLKKFQPW VTDINILEED IQKLSDEELK AKTGEFRQAL EKAKTKDEEK
AILEEILPEA FAVVREAGKR VLSMRHFDVQ LLGGIILHQG QIAEMKTGEG KTLVATLPAY
LNGLTGKGVH VITVNDYLAR RDAEWMGQVH RFLGLSVGLI QQGMNPEERK KNYTCDITYA
TNSEVGFDYL RDNMATNMEE VVQRPFNFCI IDEVDSVLVD EARTPLIISG QVERPSEKYI
KAAEIAAALS KEKEHYEVDE KARNVLLSDE GFAEAEQLLA VQDLYNPEDP WAHFVFNALK
AKELFIKDVN YIVRDDEVVI VDEFTGRVMP GRRWSDGLHQ AIEAKERVDI QPETQTLATI
TYQNFFLLYP KLSGMTGTAK TEEAEFEKIY NLQVTIIPTN KPTGRKDLSD VVYKTEVGKW
KSIAQECAEM HKEGRPVLVG TTSVEKSELL SRLLGEGKIP HQLLNAKPEN VERESEIVAQ
AGRGGAVTIA TNMAGRGTDI ILGGNAEYMA KLKLREYLMP KVVKPEDDDG LGMVRVSGLK
KSHVAKGFDP QQKVKTWKVS PQIFPVKLSQ ETEGMLKLAV NLAVKEWGER ALPELVVEDK
VAIAAEKAPT TEPVIEKLRE VYNLIRQEYE NYIEREHNQV VGCGGLHVIG TERHESRRID
NQLRGRAGRQ GDPGSTRFFL SLEDNLLRIF GGDRVAGMMQ AFGVEEDMPI ESGLLTRSLE
GAQKKVETYY YDMRKQVFEY DEVMNNQRRA IYAERRRVLE GRDLKEQVIK YAEQTMDDIV
EAYINPELPS EEWELDKLVE KVKQFVYLLA DLTPEQLFDL SMEDIRTFMH EQVRNAYDIK
EAQVNQIRGG LMRDAERFFI LQQIDTLWRE HLQQMDALRE SVGLRGYGQK DPLIEYKSEG
YELFLDMMTD IRRNVVYSLF QFQPQPAVQT TAAETV
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