Gene Tery_4498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4498 
Symbol 
ID4246152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6940571 
End bp6944248 
Gene Length3678 bp 
Protein Length1225 aa 
Translation table11 
GC content44% 
IMG OID638109381 
ProductNa-Ca exchanger/integrin-beta4 
Protein accessionYP_723957 
Protein GI113477896 
COG category 
COG ID 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAT TTTCTCCAGA TGACCATTCT TTATTTCCCG AGGAACCAGA TGAGACATCC 
CTAAATGTCC ACTATCTCCC TGGGGCTGAC TCGAACCCTG AGGTTACAGA CCCGATGATA
CAAGGTGCCT GGGGTGAGGT TCGTGACGAA TTAGCTGATT TTATCTTGGC TCCCGAGTTC
GATGACTATA TTAAAACGGC TTTTGGTGAA ACTGTGGACC CGGAGCTGGC AAAGGAGCAG
ATAAAGGATG TTTTGACTGG GGAAAATTTG CCGGAGGTTA TTATGTTGCC GGCGGCGGAT
ATGGAGCCGG CGGTGGGTGC CTATGATCCT TTGACTGGTT CAATTTATTT GGCTGATTCT
TTATTGCCTG ATACTGATGG GGTTTTGGTG GATGTGCTGT TGGAGGAGTT GGGGCATTTT
TTGGACTCTC AGTTGTCTGA GTCGGACTCC CCTGGAGATG AGGGTGAGTT ATTGGCTGCT
TTGGTGAGGG GTGAGGAGTT GACTCAGTTT CAGGTGATGA TGCTTCGGGG TCAGGATGAT
CGGGTAGATA TTTGGGTCGG GGGTGTTGAG GTTGAGGTTG AGGCTAGTGA AAAGGTTGAT
TTTGAGAAGG CTCGTAATTT TAAGGTGGGA GTTCTACCTG TGTCAGTAGC AGTAGGAGAT
TTTGATGGAG ATGGCATTCC TGATCTGGCT GTGGCGAACT TTTCTTCAGA AAACGTATCA
GTTTTATTAG GAAAAGGTGA CGGTAGTTTT GGTTCAGCCA CTAATTTTCC GGTGGGAGAC
GGAGCTAATA GAATGGTAGC AGGAGACTTT AATGGAGATG GCATTCCTGA TCTGGCTGTG
CCGAGCTCTA GGGACGACAA CGTATCAGTG TTATCAGGAA AAGGTGACGG TAGTTTTGGT
TCACCGACTA ATTTTCCGGT GGGAGACTGG CCTTTTTTCT TGGCAGCGGA AGATTTCAAT
GGAGATGGCA TTCCTGATCT GGCTGTGGCG AACCTTAGTT CAGACAACGT ATCAGTGTTA
TTAGGAAAAG GTGACGGTAG TTTTGGTTCA GCTACTAATT TTCCGGTGGG AGACGAACCA
ATATCAGTAG CAGTAGAAGA TTTTAATGGA GATGGCATTC CTGATCTGGC TGTGGCGAAC
GGTGGCGATA ACAACGTATC AGTGTTATCA GGAAAAGGTG ACGGTAGTTT TGGTTCAGCT
ACTAATTTTC CGGTGGGAGA CCGACCATTC TCAGTAGCAG CAGAAGATTT AAATGGAGAT
GGCATTCCTG ATCTGGCTGT GGCGAACGGT GGCGATGACA ACGTATCAGT GTTATCAGGA
AAAGGTGACG GTAGTTTTGG TTCAGCTACT AATTTTCCGG TGGGAGACCG ACCTGCGTCA
GTAGCAGTAG GAGATTTTAA TGGAGATGGC ATTCCTGATC TGGCTGTGGC GAACAATGGT
TCAGACAACG TATCAGTGTT ATCAGGAAAA GATGACGGTA GTTTTGGTTC AGCTACTAAT
TTTCCGGTGG GAGACGGACC TATATCAGTA GCAGCAGAAG ATTTAAATGG AGACGGCATT
CCTGATCTGG CTACGGCGAA CGAATTTTCA GACAACGTAT CCATCCTCAT CAACAAAACC
CCCATAACCA TCATCCCCAA CATCACCATC TCCGACACCA AGCTCACCGA AGGCAACACA
AATAAAACCG CCAAATTCAC GGTCACCCTA GACAACCCCA CAACCACCAC AGTCAAAGTC
AACTACACCA CAGCCAACCA AACCGCCAAA GTCAACCAAG ACTACAAACT CACCAAAGGC
ACCCTCACCT TCCGACCAGG AGAAACCAAC AAAAACATCA CAGTTCCCAT CTTGGGAGAT
AACCGAGACG AACCCCAGGA AAAATTCCGA GTCGCTCTGA GCCGCCCCCA AAATGCCAAC
ATCAAAGATG GGAGAGCTAC AGGCACCATC GTTGATAACG ACCCAGTTCC CCAAATATCC
ATCGGCGATG CCAAAATTAC GGAAGGAAAC CGAGGTCAGA AAAACATGGA ATTTGAAGTC
AAATTAAACA ACCCCAGCGG GAAAACAGTG AGAGTAAATT ATGGAACCCA AGAGGGCAGC
GCCAAGTCAG GAAAAGATTT TCGAAATCAA AGGGGAGTCC TGACATTCCA ACCAGGGCAG
ACGAAAAAAA TAGTGAACAT TCCCATTTTG GGAGATACCC TGGATGAAAA TAACGAACAG
TTTCAAGTCA AACTCAGCCG TGCCCAAAAT GGAAATTTTT CAGACAACAC AGCAGTCGGC
AGAATTATTG ATAACGACGA AACATTACCC CAGAAAACCC CCCAAATATC CATCGGGGAT
GGGGAAATAG TAGAAGGAGA CCGGGGTCAG AAAAAAATGA CATTTCAAGT CAAACTGAGC
AACCCCAGCA ACAAAACAGT CACAGTAAAT TATACCACAG TAGATGGGAG CGCTAAGTCA
GGAAAAGATT TTCAACAGAA AAGCGGCGTA GTGACATTCA GACCAGGGGA GACGAAAAAG
ACAGTTAACG TTTCAGTATT GGGAGACGCT TTATCGGAAA ATCTTGAGTT GTTTCAGGTC
AAACTCACCA GTGCCCAAAA TGGGAAATTT TCAGCTCAGA CAGATCAATA TGCCACAGGT
ATTATTCAGG ATAATGACCA ACCGCAAATA TCCATCAGTG ATGCCAAAAT TACAGAAGGC
AACAGGGATA AGAAAAACAT GAAATTTGAA GTCAAATTGA ATAGCGCCAG CAACCAAACA
GTGAAAGTAA ATTATGAGAC TATTGACGGC AGCGCCAAGT CAGGAAAAGA CTATGAAAAG
AAAAGCGGAG TCGTGATATT CAAACCAGGG CAGACGAGAA AAACCATCAA CATTTCCACT
TTGGGAGACA CATTATCAGA AAATCTTGAG TTGTTTCAGG TCAAACTCAG CGGTGCCCAA
AATGGAGAAT TTTCAGCTCA GACAGATCAA TATGCCACGG CTATTATTCA GGATAATGAC
AAGCTCCCGG AAATATCCAT CAGTGATGCT AAAATTACGG AAGGAAATAC AGAAAAGAAA
GAGATGGAGT TTGAAGTCAA GTTAGATAAG AGTAGCACTC AAACAGTGAA AGTTAATTAT
GAGACCGTTG AGGGCAGCGC TAAGTCAGGA AAAGACTTTC AAAAGAAAAG GGGAGTGGTG
ATATTCAAAC CAGGGGAGAC GAAAAAGACG GTGAATGTTC CTATTTTGGG AGATACCGAT
AATGAAGCGA ATGAGAAATT TGAGGTCATA CTCAGCAGCC CTAAAAATGC TAACTTATCG
GATGGGAAAG GAGTCGGGAC TATTCAGGAT AACGACAGAG AAGCTATTGA CTTAGGAGTT
CTTTCCGAAA AGCCAATTTT GAAGTCTGAT AAAATTGGGT TTACCACTGG AGGAGCCAAC
CGAGATACAG AAGACTATTT TCGTTTTGAG GTGGAAAAAG AAGGTTTAGT AAATATTTTT
ATGGATAGTT TTGTGCAAAA TATAGGAATG GAATTATATG ATCAAGATGA TAGTTTACTT
TTCCGGTCAA ATGTAGATGG TCTTGGTTTA GAAGCTATTA ATAAGACTTT GGACCCTGGT
ATTTATTATT TGAGAGTTTT TCCAGTGGGC TCGAATAGGA CTACATATAA TTTAAGTATT
AATATTGTTG AGAGATGA
 
Protein sequence
MDEFSPDDHS LFPEEPDETS LNVHYLPGAD SNPEVTDPMI QGAWGEVRDE LADFILAPEF 
DDYIKTAFGE TVDPELAKEQ IKDVLTGENL PEVIMLPAAD MEPAVGAYDP LTGSIYLADS
LLPDTDGVLV DVLLEELGHF LDSQLSESDS PGDEGELLAA LVRGEELTQF QVMMLRGQDD
RVDIWVGGVE VEVEASEKVD FEKARNFKVG VLPVSVAVGD FDGDGIPDLA VANFSSENVS
VLLGKGDGSF GSATNFPVGD GANRMVAGDF NGDGIPDLAV PSSRDDNVSV LSGKGDGSFG
SPTNFPVGDW PFFLAAEDFN GDGIPDLAVA NLSSDNVSVL LGKGDGSFGS ATNFPVGDEP
ISVAVEDFNG DGIPDLAVAN GGDNNVSVLS GKGDGSFGSA TNFPVGDRPF SVAAEDLNGD
GIPDLAVANG GDDNVSVLSG KGDGSFGSAT NFPVGDRPAS VAVGDFNGDG IPDLAVANNG
SDNVSVLSGK DDGSFGSATN FPVGDGPISV AAEDLNGDGI PDLATANEFS DNVSILINKT
PITIIPNITI SDTKLTEGNT NKTAKFTVTL DNPTTTTVKV NYTTANQTAK VNQDYKLTKG
TLTFRPGETN KNITVPILGD NRDEPQEKFR VALSRPQNAN IKDGRATGTI VDNDPVPQIS
IGDAKITEGN RGQKNMEFEV KLNNPSGKTV RVNYGTQEGS AKSGKDFRNQ RGVLTFQPGQ
TKKIVNIPIL GDTLDENNEQ FQVKLSRAQN GNFSDNTAVG RIIDNDETLP QKTPQISIGD
GEIVEGDRGQ KKMTFQVKLS NPSNKTVTVN YTTVDGSAKS GKDFQQKSGV VTFRPGETKK
TVNVSVLGDA LSENLELFQV KLTSAQNGKF SAQTDQYATG IIQDNDQPQI SISDAKITEG
NRDKKNMKFE VKLNSASNQT VKVNYETIDG SAKSGKDYEK KSGVVIFKPG QTRKTINIST
LGDTLSENLE LFQVKLSGAQ NGEFSAQTDQ YATAIIQDND KLPEISISDA KITEGNTEKK
EMEFEVKLDK SSTQTVKVNY ETVEGSAKSG KDFQKKRGVV IFKPGETKKT VNVPILGDTD
NEANEKFEVI LSSPKNANLS DGKGVGTIQD NDREAIDLGV LSEKPILKSD KIGFTTGGAN
RDTEDYFRFE VEKEGLVNIF MDSFVQNIGM ELYDQDDSLL FRSNVDGLGL EAINKTLDPG
IYYLRVFPVG SNRTTYNLSI NIVER