Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4422 |
Symbol | |
ID | 4246075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6816642 |
End bp | 6817727 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638109306 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_723883 |
Protein GI | 113477822 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.544118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTC GAAGTCTAAT TAGTTATACT ACTGTTGCTG CTACAACTGC CCTGGCTTTA CCTGCATTTA GTCAAACCAA ATTCCCACAG ATAAAATGGA AAATGACGAC AAGTTGGCCA AAAACTCTCA ATACTTTATT TGGTGGAGCC GAGAAGATTT GCGATCGCGT AGCAGCTTTA ACCAATGGTA GATTTACTAT TACTCCCTAT CAAGCTGGTG AAATAGTAGG AGGGTTAGAA GTTTTAGATT CTGTACAACA GGGTACTATA GAATGTGGTC ATACTTGTAG TTCTTACTAT AAAGGCAAAA ACTCGGCCTT AGTTTTTGCT ACCAGTGTTC CCTTCGGTTT GACTGCCCAA CAACAGAATG GGTGGTTATA TCATGGAGGG GGTTTAGAAG CTATACAAAA AGTTTATACT GATTTTAATG TGATTAACTT CCCGGCGGGT AACACAGGGG CGCAAATGGG TGGTTGGTTT AGGCAGGAAA TTAATACTTT GGCTGACCTC AATGGTTTAA AGATGCGCAT TCCTGGTTTG GGAGGAGATG TAATGAGCAA GTTGGGAGTA AATGTTCAGG TTTTACCAAG TGGGGAAATT TATTTGGCTT TGGAAAGAGG TGTCATTGAT GCTGCTGAGT TGTCGGGGCC TTATGATGAC CACAAATTGG GTTTGTATAA GGCAGCAAAA TATTATTATT ATCCTGGTTG GTGGGAACCT GGTCCGACTA TTGATATATT GGTTAATCTA GATGCTTGGA ACAAACTACC AAAAGAATAT CAAGAAATTT TTCAGACTGC TGCTTATGAA ACTAATTTGA ATATGTTGGC TCAATATGAT GCTTTGAATA GTAAAGCATT GCTAAAATTG ATGGCAAAAG ATGTCCAATT CAAGACTTTT AGTCCAGAAA TCATGGAAGC TGCTCAGAAA GCTACTTTTG ATATCTGTGA GGAAAATGCA AGTCAAGATG AGAGTTTTAA GGAAGTTTAT CAACAATGGA AAAAATTTAG AGAACAAGTT TTTAATTGGA ATAAGTTTAA TGAATTAAGT TTTGCCCAGT TTTCTTTTAA TAATTCCTCA AGCTGA
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Protein sequence | MKRRSLISYT TVAATTALAL PAFSQTKFPQ IKWKMTTSWP KTLNTLFGGA EKICDRVAAL TNGRFTITPY QAGEIVGGLE VLDSVQQGTI ECGHTCSSYY KGKNSALVFA TSVPFGLTAQ QQNGWLYHGG GLEAIQKVYT DFNVINFPAG NTGAQMGGWF RQEINTLADL NGLKMRIPGL GGDVMSKLGV NVQVLPSGEI YLALERGVID AAELSGPYDD HKLGLYKAAK YYYYPGWWEP GPTIDILVNL DAWNKLPKEY QEIFQTAAYE TNLNMLAQYD ALNSKALLKL MAKDVQFKTF SPEIMEAAQK ATFDICEENA SQDESFKEVY QQWKKFREQV FNWNKFNELS FAQFSFNNSS S
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