| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4384 |
|---|
| Symbol | |
|---|
| ID | 4246037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 6752481 |
|---|
| End bp | 6753428 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638109269 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_723846 |
|---|
| Protein GI | 113477785 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2006] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.149576 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACTG TTAGTTTAAT CCGAGCTAAT TCCTATAAAA TTCAAGAATT AGAAAAATCC
ATAGAGAATC TTTTAGAGCC ATTAGGGGGA ATTAATGCTT TTGTCAAAGC AGGCGATCGC
GTTTTACTTA AACCAAATTT GCTGACAGGT TCTCGCCCCA CAAAAGAATG CGTAACTAGA
AAAGAAGTAG TTTATTGTGT CGCTAAAATG GTAAAAAAAG CTGGCGGTAA ACCTTTTTTA
GGCGATAGTC CAGCTTTTGG TAGTGCTATG GGTGTGGCAA AAGCAAATGG TTACTTATCA
TTGCTCAAAG AATTTGACTT ACCAATAGTT GAATTTCACG GGAAACGTTA CGACATAGTT
AGTGAAGAGT TTAATCATTT ACTATTAAGT AAAGAAGCAA TGGCAGCAGA TGTAATAATT
AATTTGCCTA AGCTGAAATC TCATGTGCAA TTAACTATGA CAATGGGAGT CAAAAATTTA
TTTGGTTGTG TACCGGGAAA AATGAAAGCT TGGTGGCATT TAGAAGCAGG TAAAGATGCT
GATCGTTTCG GTAAAATGCT AGTAGAAACA GCAAAAGCAA TTAATCCAGA TTTGACTATT
ATTGATAGTA TTATCGGTCA AGAAGGTAAT GGTCCTATTG GTGGAGAACC TAGAAAGTTA
GGTATTTTGG GAGCATCTAT AGATGTATTT GCCCTTGACC GAACATTAGT AGAAATTCTC
AAAGTTAATC CTGCAGAAAT TCCCACAGTG GCAGTTGCTG AAGAAATGGG GTTTTGTTCT
GATTTAAAAA GGGTTAATTT TCCATTATTA CAGCCTATTG AAGTTGAGGT AGAAAATTGG
CAGTTACCCA CAACTAAGAA ACCTATTGAT TTTGGAGTTC CACGCATAAT TAGGTCTACT
TTTAAACATC TATATGTTAA GTTTATTCAA GAACCAATGA ATATTTAA
|
|---|
| Protein sequence | MSTVSLIRAN SYKIQELEKS IENLLEPLGG INAFVKAGDR VLLKPNLLTG SRPTKECVTR
KEVVYCVAKM VKKAGGKPFL GDSPAFGSAM GVAKANGYLS LLKEFDLPIV EFHGKRYDIV
SEEFNHLLLS KEAMAADVII NLPKLKSHVQ LTMTMGVKNL FGCVPGKMKA WWHLEAGKDA
DRFGKMLVET AKAINPDLTI IDSIIGQEGN GPIGGEPRKL GILGASIDVF ALDRTLVEIL
KVNPAEIPTV AVAEEMGFCS DLKRVNFPLL QPIEVEVENW QLPTTKKPID FGVPRIIRST
FKHLYVKFIQ EPMNI
|
|---|
| |