Gene Tery_4229 details

Gene Information

• Locus tag: Tery_4229
• ID: 4245881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Trichodesmium erythraeum IMS101
• Kingdom: Bacteria
• Replicon accession: NC_008312
• Strand: -
• Start bp: 6526291
• End bp: 6529743
• Gene Length: 3453 bp
• Protein Length: 1150 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638109125
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_723703
• Protein GI: 113477642
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.591053
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACAATTC CTAAAAAACG AAATTCTGGT CTTCAGGTAT TCTTTGAAGA TACTGAAATA 
AATGTAGAAA AAAAACCAGA AACTATAACT GAATCTGAAA CAATTTTATC AACTCCAAGG 
TCTCAACTAA AAACTGATAT TGATATAAAT AATAATCCTA ATATTAATCC ATTATTAGTA 
GCTATGAAAG CTGCTAGAGA TGGAGACTTT ACTGTGCGTA TTCCAGAAAA TAATGGCTTA 
GGAGAAGTAG CTATTGTTTT TAATCAAATG ATAGCAATTA ATCAAAACTT TGCAGAAGAA 
ATTGGGCGCA TTAGTCGTGA AGTTTGGCAA GAAGGAGAAT TAACCACTAG AAAAAGTTTC 
ACAGAAGTTA AAGGCTCATG GAAATCAAGT ATTGATAGCC TCAATGAACT AATTAATAAT 
TGGACCAAAC CTAGTAGGGA AGTTTCTCTG GTTTTAGAAG CAGTGGCGAA TGGAGATTTG 
TCAAAAAAAA TTAACTTTCA ATTCGAAGGA AAACCCTTAA ATGAAGAATT CTACCGTATT 
GGGAGCATTG TTAATCAAAT AGTGGACAAA CTTAATAGTT TTTCCTCAGA AGTAACGCGG 
GTTGCTCAGG AAGTGGGTAC AGAAGGTAAA TTAGGAGTCC AGGCCAAGGT AGAAGGGTTA 
TCTGGTGTTT GGAAAGAGTT GACTGATAAT GTGAATGGTA TGGCAGATCA CCTCACTTTA 
CAGGTGAGAA ATATTGCTGA GGTAGCTACA GCAGTTGCTC AGGGAGACTT AACTCAGAAA 
ATTACTGTTG ATGCTCAAGG GGAGATATTG GAACTTAAGA CTACTTTGAA TCAAATGGTA 
GACCAACTCA ATGGGTTTTC ATCTGAAGTC AGTAGGGTGG CCAAAGAAGT AGGAACCGAA 
GGAATATTGG GAGGCCAAGC GAAGGTGGAA GGAGTGGCTG GAATATGGAA AGAGTTGACT 
GATAATGTGA ATGGTATGGC AGCTAACCTC ACTTTACAGG TGAGAAATAT TGCTGAGGTG 
GCTACAGCAG TTGCTCAGGG GGACTTAACT CAGAAAATTA CTGTTGATGT TCAAGGGGAG 
ATATTGGAAC TGAAGACTAC TTTGAATAAA ATGGTAGACC AACTCAATGG GTTTTCATCT 
GAAGTCAGTA GGGTGGCCAA AGAAGTAGGA ACCGAAGGAA TATTGGGAGG CCAAGCGAAG 
GTGGAAGGAG TGGCTGGAAT ATGGAAAGAG TTGACTGATA ATGTGAATGG TATGGCAGCT 
AACCTCACTT TACAGGTGAG AAATATTGCT GAGGTGGCTA CAGCAGTTGC TCAGGGGGAC 
TTAACTCAGA AAATTACTGT TGATGTTCAA GGGGAGATAT TGGAACTGAA GACTACTTTG 
AATAAAATGG TAGACCAACT CAATGGGTTT TCATCTGAAG TCAGTAGGGT GGCCAAAGAA 
GTAGGAACCG AAGGAATATT GGGAGGCCAA GCGAAGGTGG AAGGAGTGGC TGGAATATGG 
AAAGAGTTGA CTGATAATGT GAATGGTATG GCAGCTAACC TCACTTTACA GGTGAGAAAT 
ATTGCTGAGG TAGCTACAGC AGTTGCTCAG GGGGACTTAA CTCAGAAAAT TACTGTTGAT 
GTTCAAGGGG AGATATTGGA ACTGAAGACT ACTTTGAATA AAATGGTAGA CCAACTCAAT 
GGGTTTTCAT CTGAAGTCAG TAGGGTGGCT AAAGAAGTAG GAACCGAAGG AATATTGGGA 
GGCCAAGCGA AGGTGGAAGG AGTGGCTGGA ACATGGAAAG AGTTGACTGA TAATGTGAAT 
GGTATGGCAG CTAACCTCAC TTTACAGGTG AGAAATATTG CTGAGGTAGC TACAGCAGTT 
GCTCAGGGGG ACTTAACTCA GAAAATTACT GTTGATGTTC AAGGGGAGAT ATTGGAACTG 
AAGACTACTT TGAATAAAAT GGTAGACCAA CTCAATGGGT TTTCATCTGA AGTCAGTAGG 
GTGGCTAAAG AAGTAGGAAC CGAAGGAATA TTGGGAGGCC AAGCGAAGGT GGAAGGAGTG 
GCTGGAACAT GGAAAGAGTT GACTGATAAT GTGAATGGTA TGGCAGCTAA CCTCACTTTA 
CAGGTGAGAA ATATTGCTGA GGTAGCTACA GCAGTTGCTC AGGGGGACTT AACTCAGAAA 
ATTACTGTTG ATGTTCAAGG GGAGATATTG GAACTGAAGA CTACTTTGAA TAAAATGGTA 
GACCAACTCA ATGGGTTTTC ATCTGAAGTA ACTAGGGTGG CTAAAGAAGT AGGGACCGAA 
GGAACATTGG GAGGCCAAGC GAAGGTGGAA GGAGTGGCTG GAATATGGAA AGAGTTGACT 
GATAATGTGA ATGGTATGGC AGCTAACCTC ACTTTACAGG TGAGAAATAT TGCTGAGGTG 
GCTACAGCAG TTGCTCAGGG GGACTTAACT CAGAAAATTA CTGTTGATGC TCAAGGGGAG 
ATATTGGAAC TGAAGACTAC TTTGAATAAA ATGGTAGACC AACTCAATGG GTTTTCATCT 
GAAGTCAGTA GGGTGGCTAA AGAAGTAGGG ACCGAAGGAA CATTGGGAGG CCAAGCGAAG 
GTGGAAGGAG TGGCTGGAAC ATGGAAAGAG TTGACTGATA ATGTGAATGG TATGGCAGCT 
AACCTAACTG AACAAGTAAA AAAAATTGCG AAAGCAGCGA TCGCTGTGGC CAAGTCATCT 
GAGGAGATGA TGGCGGAAAG TCAAACTATG AGTCAAGCAT CTCAAGAAAC CTCGACTCAA 
GCAGAGTCAG TTTCTAGTAA CGCTGCACAA GTGAGCGCTA ATGTTCAGTC AGTTGCTACT 
GGTGTAGAAG AAATGACTAC TAGCATCCAA GAAATTGCTA AAAATGCTAC TAATGCTGCT 
CAAGTTGCCA CAACTGCTGT AAAAACTGCT GAAACGACTA ATGAAACTAT TGGTAAGTTA 
GGAGTTAGTA GTGCAGAAAT TGGTAATGTG ATTAAAGTTA TTACTTCTAT TGCTCAACAA 
ACCAACCTTC TTGCTCTTAA TGCCACTATT GAAGCAGCAA GAGCGGGAGA AGCAGGGAAA 
GGTTTTGCGG TAGTTGCCAA TGAAGTTAAA GAATTAGCAA AACAAACCGC TAGTGCAACT 
GAAGATATTA GTCAAAAAAT TGAAGCTATT CAAGGGGATA CTAGAGGAGC AGTAGAAGCT 
ATCGGTCAAA TTACTACTAT TATTAGTCAA ATTAATGACA TCCAAGGTAC GATCGCCTCG 
GCGGTAGAAG AGCAAACCGC CACTACCAAT GAAATTGCCC GTAATGTTAA CCAAGCAGCA 
GAAAGGTCAT CGGGAATTGC CCTTAATATT ACCAGCGTGG CAAAAACAGC CCAAAGTACC 
AGTAATGGAG CAGCCAAAAC CCAAAAATCT GCAACTGAGT TATCCAAAAC GGCAGGAGAC 
TTACATGAAT TAGTAAATCA GTTTAAATTT TAG 

 

Protein sequence

MTIPKKRNSG LQVFFEDTEI NVEKKPETIT ESETILSTPR SQLKTDIDIN NNPNINPLLV 
AMKAARDGDF TVRIPENNGL GEVAIVFNQM IAINQNFAEE IGRISREVWQ EGELTTRKSF 
TEVKGSWKSS IDSLNELINN WTKPSREVSL VLEAVANGDL SKKINFQFEG KPLNEEFYRI 
GSIVNQIVDK LNSFSSEVTR VAQEVGTEGK LGVQAKVEGL SGVWKELTDN VNGMADHLTL 
QVRNIAEVAT AVAQGDLTQK ITVDAQGEIL ELKTTLNQMV DQLNGFSSEV SRVAKEVGTE 
GILGGQAKVE GVAGIWKELT DNVNGMAANL TLQVRNIAEV ATAVAQGDLT QKITVDVQGE 
ILELKTTLNK MVDQLNGFSS EVSRVAKEVG TEGILGGQAK VEGVAGIWKE LTDNVNGMAA 
NLTLQVRNIA EVATAVAQGD LTQKITVDVQ GEILELKTTL NKMVDQLNGF SSEVSRVAKE 
VGTEGILGGQ AKVEGVAGIW KELTDNVNGM AANLTLQVRN IAEVATAVAQ GDLTQKITVD 
VQGEILELKT TLNKMVDQLN GFSSEVSRVA KEVGTEGILG GQAKVEGVAG TWKELTDNVN 
GMAANLTLQV RNIAEVATAV AQGDLTQKIT VDVQGEILEL KTTLNKMVDQ LNGFSSEVSR 
VAKEVGTEGI LGGQAKVEGV AGTWKELTDN VNGMAANLTL QVRNIAEVAT AVAQGDLTQK 
ITVDVQGEIL ELKTTLNKMV DQLNGFSSEV TRVAKEVGTE GTLGGQAKVE GVAGIWKELT 
DNVNGMAANL TLQVRNIAEV ATAVAQGDLT QKITVDAQGE ILELKTTLNK MVDQLNGFSS 
EVSRVAKEVG TEGTLGGQAK VEGVAGTWKE LTDNVNGMAA NLTEQVKKIA KAAIAVAKSS 
EEMMAESQTM SQASQETSTQ AESVSSNAAQ VSANVQSVAT GVEEMTTSIQ EIAKNATNAA 
QVATTAVKTA ETTNETIGKL GVSSAEIGNV IKVITSIAQQ TNLLALNATI EAARAGEAGK 
GFAVVANEVK ELAKQTASAT EDISQKIEAI QGDTRGAVEA IGQITTIISQ INDIQGTIAS 
AVEEQTATTN EIARNVNQAA ERSSGIALNI TSVAKTAQST SNGAAKTQKS ATELSKTAGD 
LHELVNQFKF