| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4196 |
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| Symbol | |
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| ID | 4245848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 6475318 |
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| End bp | 6476901 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638109095 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_723673 |
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| Protein GI | 113477612 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit
[TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAG TTCTTGTATC TGATTCAATC GATCAAAATG GAATAAATAT TCTCTCCCAA
GTAGCTCAGG TAGATATAAA AATAGGTCTA CCAGTAGAAG AACTAGTAAA AATTATACCA
GAATATGATG GTTTAATGAT TCGCTCTGGT ACCAAAGTTA CCAAAGAAAT AATAGAAGCT
GCCGATAAAC TAAAAATTAT TGGTCGTGCT GGAGTGGGTG TAGATAATGT AGACGTACAA
GCAGCAACCC GTAAAGGTAT TGTGGTAGTC AACTCACCAG AAGGAAATAC AATTGCTGCA
GCAGAACACG CTTTGGCAAT GATGTTATCT ATGTCGCGCC ACGTTCCAGA AGCTAACCAA
TCAATTATCA ATGCTCAATG GGACCGCAAA AAGTTTGTCG GGGTCGAGGT CTACAAAAAA
ACTCTCGGTG TTGTTGGTTT AGGTAAAATT GGCTCCCATG TAGCTAAGGT AGCAAAAGCT
ATGGGAATGA AAATTTTGGC TTATGATCCA TTTATTTCTG AAGAAAGAGC AGAACAATTG
GGTTGTAGTT TGGTAGATCT GGATCTTTTA GTCCAAGAGT CTGATTATAT TACTCTCCAT
ATACCCAAAA CTGACGAAAC TTATCACTCA ATTAATGCTG AAACTTTTGC CAAAATGAAA
CCCACAGCTC GGATTATTAA TTGTTCTAGA GGTGGCATTA TTGATGAAGT TGCTTTATCC
AAAGCTCTAA AAGAAGGAAA AATTGCTGGA GCTGCTTTAG ATGTATATGA AAATGAGCCT
CTAGAAGTTG AGTCCCCACT ACGAGATTTG GGACAAAAAA TTGTGATGAC TCCTCATTTG
GGTGCTTCTA CTGCTGAAGC TCAAGTGAAT GTAGCAATAG ATGTTGCTGA ACAAATTCGA
GATGTATTGT TAGGGCTGCC TGCCAGATCG GCAGTGAATA TCCCTGGTAT GTATCCTGAT
ACTTTAAAAA AACTGAAGCC CTATTTACGA TTGGCCGAAA CTCTTGGTAA TTTGGTAAGT
CAGTTAGCCG GTGGGCGTAT TGATTTTCTC AATGTTCGTC TTGAAGGAGA TTTGGCCGGT
GGAGATAGTA AACCTGTAGT AGTAGGAGCT TTAAAGGGAT TACTTTCTCA AGCTTTGCGA
GAGCGCGTCA ATTATGTAAA TGCTTTTATT GAAGCTAAAG AACGAGGTAT TCGAGTAGTG
GAAACTAGAG ATGATTCAGT ACGAGATTAT ACTGGTTCAT TACATCTAGA AGCAAAAGGG
TCTCTGGGTG AACATAATGT TCGAGGTTCT TTGCTGGGAA AAGATGAGAT TCGGATTACT
AATATTGATG GGTTTCCAAT TAATGTCCCT CCTAGCCCAT ATATGTTATT GACTCTCCAC
CGAGATATGC CGGGAATTAT TGGTAAAATT GGTTCACTTC TGGGGAGTTT TAATGTCAAT
ATTGCTAGTA TGCAGGTGGG ACGTAAAATT GTTAGAGGTG ATGCTGTAAT GGTATTAAGT
GTTGATGACC CATTACCAGA AGAAATATTA ACTGAAATTC TTAAAGAACC AGGAATTAGG
AATGCTTATA CAGTTGCTCT TTGA
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| Protein sequence | MPKVLVSDSI DQNGINILSQ VAQVDIKIGL PVEELVKIIP EYDGLMIRSG TKVTKEIIEA
ADKLKIIGRA GVGVDNVDVQ AATRKGIVVV NSPEGNTIAA AEHALAMMLS MSRHVPEANQ
SIINAQWDRK KFVGVEVYKK TLGVVGLGKI GSHVAKVAKA MGMKILAYDP FISEERAEQL
GCSLVDLDLL VQESDYITLH IPKTDETYHS INAETFAKMK PTARIINCSR GGIIDEVALS
KALKEGKIAG AALDVYENEP LEVESPLRDL GQKIVMTPHL GASTAEAQVN VAIDVAEQIR
DVLLGLPARS AVNIPGMYPD TLKKLKPYLR LAETLGNLVS QLAGGRIDFL NVRLEGDLAG
GDSKPVVVGA LKGLLSQALR ERVNYVNAFI EAKERGIRVV ETRDDSVRDY TGSLHLEAKG
SLGEHNVRGS LLGKDEIRIT NIDGFPINVP PSPYMLLTLH RDMPGIIGKI GSLLGSFNVN
IASMQVGRKI VRGDAVMVLS VDDPLPEEIL TEILKEPGIR NAYTVAL
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