Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4109 |
Symbol | |
ID | 4245623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6338712 |
End bp | 6339935 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638109010 |
Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
Protein accession | YP_723590 |
Protein GI | 113477529 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACA AAATAATTAA TACAAATCCA TTAAAGTCTA AAATAATTAT ACAAAATCTA ATTAAAATCT ACGGTAAAAA ACATCGTGCT GCTCTTAAAT TATTTCGGGA GGGAAAAACA AGGGACGATA TATTACAGTC TACAGGTAAT GTTTTGGGAT TAGCTGATGT ATCTATTGAT ATTGGTACAG GGGAATTATT TGTGGTAATG GGGTTATCTG GTTCGGGAAA GTCTACCCTA GTTCGCTGCA TTAATCGTTT AGTTGATCCG ACAAGTGGAC ATATTTATAT TGATGGTGAA GATATTGCTC ATGCTGATGA GAAACGGATG CGAGATATAC GACTGAATAA AGTTTCGATG GTATTTCAAC GCTTTGGGTT ATTTCCTCAC AAAACAGTAG CGGAAAATGT AGAGTATGGC CTAAAGGTAC GGGGGGTTTC AACAACTCAT CGTCGTCAGA AAGCTTTAGA AACATTGGAG GTTGTTGGTT TAGAGAAATG GGCAAATTAT CAACCTACTT CTTTGAGTGG GGGAATGCAG CAACGGGTGG GTTTGGCTCG TGCTTTGGCG ACTGATGCAG ATATTTTATT GATGGACGAA GCTTTTAGCG CTCTTGACCC ACTGACTAGG GGAGAGATGC AGGATGAATT GTTACGACTT CAGAAAGAAT TGCATAAGAC TATAGTTTTT ATTAGCCATG ATATGCAAGA AGGTTTGAAG TTGGGCGATC GCATTGCGGT TATGAAAGAT GGTGCAATTG TCCAATTGGG GACTCCTGAA GAATTAGTTA CTAATCCTAA AAATGATTAT ATTAAGGCTT TTACTGAAGA AGTAAATTCA GCACAAGTTA TTACGGTAGG GTCAATTATT AGTAAAAGAA CTTCCCTGAT AATTGGTCAA AATTCTGTTA GCTATGGTTT GGAGGAAATG TTAAAGGATA ACCTTCAACT TTTGTATGTA GTTGATGAGT ACAATAAACC TATTGGTTTG TTGAAAAGAG AAGGTTTGCA AGAGTTTATC AAACAGGGAG AGGAAGATTT TAGGGCAATT ATGGAAACTG ATTTTCCGAT AGTCAATAGT TCTACTCCCT TGGAGGATAT TTTTTACCTT TACAAACAGG GTTTTCCTCT GGCGGTGGTT AATGACAAAA AAGAATTTCA AGGTATGGTA GAGGCAGTTG ATGTACTGAC GAGTTTGGGA AAACCAAATA AAAATTATGG TTAA
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Protein sequence | MNDKIINTNP LKSKIIIQNL IKIYGKKHRA ALKLFREGKT RDDILQSTGN VLGLADVSID IGTGELFVVM GLSGSGKSTL VRCINRLVDP TSGHIYIDGE DIAHADEKRM RDIRLNKVSM VFQRFGLFPH KTVAENVEYG LKVRGVSTTH RRQKALETLE VVGLEKWANY QPTSLSGGMQ QRVGLARALA TDADILLMDE AFSALDPLTR GEMQDELLRL QKELHKTIVF ISHDMQEGLK LGDRIAVMKD GAIVQLGTPE ELVTNPKNDY IKAFTEEVNS AQVITVGSII SKRTSLIIGQ NSVSYGLEEM LKDNLQLLYV VDEYNKPIGL LKREGLQEFI KQGEEDFRAI METDFPIVNS STPLEDIFYL YKQGFPLAVV NDKKEFQGMV EAVDVLTSLG KPNKNYG
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