| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4084 |
|---|
| Symbol | |
|---|
| ID | 4242112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 6303539 |
|---|
| End bp | 6304093 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638108985 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_723566 |
|---|
| Protein GI | 113477505 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00172895 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTC AATCTCTCAA TCAAATTTTA GCCTCTCTCA AAATTATGGA GCGATCGCCC
CAACAAAAAC AGTTTCAAAA AGTAATGGAA TGTTGGGAAC AACTTTTAGG CACTCTGGCT
ATAAATACTC AACCTCTATA TATTAAGCGG GAAATTTTAT ATGTAGCAAC CTCAAGCGCT
ACTTTGTCTA CTGAACTTAG TTTTCAGGTT CCCCAACTTT TACAGAAGCT CAATCACCTT
TTGCCCAAAC CTCTGGATAA TATCCGGTTT TCTAGTGCTC ATTACCGTAC CTATCATCGG
AATAAATTAG TAGATACTGA AAAAAATGAT TGGCTAGAAC ACCCTAGTAT GATTTCTAAG
TCTGAAAAAC TACCCTTGCT AAAATCAACT CACAAAAATC AGAGTCCTCA GACCACATTT
GAAAATTGGG CGAAAGCTGT CAAAGCTCGG TCCCAGCTTT TACCTATATG TCCTGAATGC
CAATCTCCCA CACCTCCTGG AGAAATTCAA CGTTGGTCTG TCTGTGCAAT TTGTGCCACG
AAAAAGTGGT CATAA
|
|---|
| Protein sequence | MDFQSLNQIL ASLKIMERSP QQKQFQKVME CWEQLLGTLA INTQPLYIKR EILYVATSSA
TLSTELSFQV PQLLQKLNHL LPKPLDNIRF SSAHYRTYHR NKLVDTEKND WLEHPSMISK
SEKLPLLKST HKNQSPQTTF ENWAKAVKAR SQLLPICPEC QSPTPPGEIQ RWSVCAICAT
KKWS
|
|---|
| |