Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4029 |
Symbol | murC |
ID | 4242057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 6227282 |
End bp | 6228952 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638108939 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_723520 |
Protein GI | 113477459 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.26578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0724066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATCGC GTGTTAAGGG TGTGGTGTGT GTGGATTTTA AGGAGCAATT AATGAGTAAA TATGTTGATT TAACTGGTAA ACCATTTCAT TTTATTGGTA TTGGGGGCAT CGGAATGTCT GCTCTTGCTT ATATTTTAGC TAAACGCAAG TTGCCTACTT ATGGCTCCGA TATCAAATCA AGCCATATAA CAAGACGCTT AGAAGCAATA GGAGCCCACA TATTCTGGCA CCAAGAAGCA AAAAATTTAG AGTTATTTCA GCAAACTACT GAAGAACAAA ATTTATTTCT GTCAAACAAT TCAAGCTTAA ATTTATCTCA ATTTACTCCT TGCATAAGTC TAGGAGAAGT AACAACAAAA AAACATAATG TCAAATTAGA AAATCACAAA GGAATTTCTC AACTACCACA AGTAGTTTGT TCAACAGCAA TTAATACAAC AAACTCTGAG TATAAGGCAG CAGTTGAACT TGGATGTCCA ATTTTTCATC GCTCAGATTT ATTGGCAGCC CTAATTCAGG ATTATCAAAG TATAGCTGTA GCTGGTACCC ATGGCAAAAC TACAACTAGC AGCTTAATTG GGTTTATGCT TTTAGAGGCT GGTTTGGACC CCACCATTGT TATTGGTGGA GAAGTAGACG CCTGGGGAGG TAATGCTCGT TTGGGTAGAA GTCCTTATCT GGTGGCAGAA GCAGACGAGT CGGATGGCTC TTTAGTTAAA TTATCTGCTC ATATTGGTGT AGTGACCAAT ATTGAGTTAG ACCATCCAGA CCATTATGAT AGTTTGGATC AAGTGGTAGA AATTTTCCAA GTTTTTAAAG AAAACTGCCA AAATCTAGTA GGTTGTATTG ACTGCTCTAC AGTTAGAGAA AAACTCCAGC CAACTATTAG TTATAGTATT AACTTCGAAA GTGACGCTCA CTATAAAGTA GATTGTGTAC ATTACCAATC TAATGTTACC TTAGCTCGTG TTTGGGAAAA AGGCCAAATT TTGGGACAAT TAAAGTTGAG GTTATTGGGT AAACATAATT TAAGTAATGC TTTGGCAGCA GTGGCAGTAG GTAGATTATT AGGTTTAGAA TTTTCTACTA TTACCTCGGC GATCGCTCTT TTTGAAGGTG CTCATCGTCG TTTTGAATAT CGAGGAGAGT GCAATGGTAT TGTATTTGTT GATGACTATG CTCATCATCC CAGTGAAATT AATGCAACTC TAGCAGCGGC TAACTTACAA AAAAATCAGG AATTAAGTCC CAAGCCTCAT ATATCAACAA AAAAATTAAC ACTCAAAACA CAAAATAACT CATTGAAGAT CGAAAGAGTT GTTGCTATAT TCCAACCTCA TCGTTATAGT CGTACTCAGG CTTTTATTTC TGAGTTTGCT CAATCTTTTA ATGACGCTGA CATGGTAATT GTTACCAATA TCTACAGTGC AGGAGAATCA TCTGAGGGTC AAATTAACAG CCAACAAGTA GCTGAAGCTA TTTCTAGGTA TCATCGACAA GTTTACTATC GATCATCTTT AGACTCAGTA AGTAAATTTT TGTACCAAGT TCTTAAACCA GGAGATTTGG CAATATTTCT AAGTGCGGGT AACCTAAATC AGATTATCCC AGAACTTATG GCACGTTATC AACAACCTCA CTACCAGGTC AAGTCTTGTG AAATAGCCTA A
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Protein sequence | MISRVKGVVC VDFKEQLMSK YVDLTGKPFH FIGIGGIGMS ALAYILAKRK LPTYGSDIKS SHITRRLEAI GAHIFWHQEA KNLELFQQTT EEQNLFLSNN SSLNLSQFTP CISLGEVTTK KHNVKLENHK GISQLPQVVC STAINTTNSE YKAAVELGCP IFHRSDLLAA LIQDYQSIAV AGTHGKTTTS SLIGFMLLEA GLDPTIVIGG EVDAWGGNAR LGRSPYLVAE ADESDGSLVK LSAHIGVVTN IELDHPDHYD SLDQVVEIFQ VFKENCQNLV GCIDCSTVRE KLQPTISYSI NFESDAHYKV DCVHYQSNVT LARVWEKGQI LGQLKLRLLG KHNLSNALAA VAVGRLLGLE FSTITSAIAL FEGAHRRFEY RGECNGIVFV DDYAHHPSEI NATLAAANLQ KNQELSPKPH ISTKKLTLKT QNNSLKIERV VAIFQPHRYS RTQAFISEFA QSFNDADMVI VTNIYSAGES SEGQINSQQV AEAISRYHRQ VYYRSSLDSV SKFLYQVLKP GDLAIFLSAG NLNQIIPELM ARYQQPHYQV KSCEIA
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