Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3919 |
Symbol | |
ID | 4244002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 6054014 |
End bp | 6055195 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638108842 |
Product | hemolysin-type calcium-binding region |
Protein accession | YP_723424 |
Protein GI | 113477363 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.525194 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATA TTTTAGGAGA TGACAATAAT AACTTCTTAA TAGGTTCTCC AGAACCTGAC CTTATGGAAG GTTTTGGTGG AAATGACACT ATTTTTGGTG AAAAAGGAGA TGATACTCAA AGCGGAGGAG ATGGAGTCGA CGAAATTTTT GGTGGCATTG GATCTGATTC TTTAATTGGT GGTGAAGATA ACGATTTTCT AAAAGCAGAA GATGGACGCG ACTTAGCATT TGGAGGTCCT GGAGATGATA GTATTGAAGG TGGTCCCGGA AATGATACCC TAACAGGAGA AAATGGCAAC GACTCTTTAT TTGGAGAAAC TGGAGATGAC CTTATAATAG GTAGCCAAGG ACTTGATTAT ATTATTGGAG GAGGAGGTAA CGATACATTA AGAGGTAATC AAGGGAATGA TAGTCTAGTT GGAAATGTTG ATGATGATCT AATATTTGGG GACCAAGGAA ACGATACTGG CAGTGGAGGT ACAGGTAATG ATTCTCTTTT AGGTGGTGAT GGTGATGACT CTTTAGACGG AGGTAGTGGT AATGATACTA TATTTGGTGA ATCAGGTAAC GATTCTCTAT TTGGCATTAT TGGCAGTGAT TTTATTAATG GTAATAGGGG TAACGATCAA GTTTTTGGTG GAGAAAATGC AGATAATCTT CGTGGTGGAA AAGGTAATGA TACAATATTT GGAGAACTTG AGAATGACTC TCTCTTCGGT GACTCAAACA ACGACCTAGT TATTGGTGGT ATTGGTGATG ATACATTGTT TGGTGGAAAG AATAATGATA CCCTTCAAGG TAGTGATGGT AATGACTCTT TGTTAGGGGA TCTAGGCAAC GATATATTAT TTGGAGGTGG GGGAGAAGAT ACATTAACTG GTGGTGAGGG AGAAGACACT TTTGTACTAC CTGGAGAACT AGGTAGTATT GATATAATTA ATGATTTTAA TCCCTTAGAA GATTTCTTAG CTTTAAGTGG TAATTTAACT TTTGAGGATT TAAGTTTTCA ACAACAAACT GGCTTAAACT TCAGAGATAC ATTAATCACT ATTAATAATG ACAGATTATT AGCCATATTA GTAAATGTTC CAGCCTCCAT AATTTCAGAG AAAGACTTCA TAGATGTTAG CCAACCTTTA CTTGATTTTG ATTCTAAGTA TACTGGCAAT GAAGTTTTAT AA
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Protein sequence | MANILGDDNN NFLIGSPEPD LMEGFGGNDT IFGEKGDDTQ SGGDGVDEIF GGIGSDSLIG GEDNDFLKAE DGRDLAFGGP GDDSIEGGPG NDTLTGENGN DSLFGETGDD LIIGSQGLDY IIGGGGNDTL RGNQGNDSLV GNVDDDLIFG DQGNDTGSGG TGNDSLLGGD GDDSLDGGSG NDTIFGESGN DSLFGIIGSD FINGNRGNDQ VFGGENADNL RGGKGNDTIF GELENDSLFG DSNNDLVIGG IGDDTLFGGK NNDTLQGSDG NDSLLGDLGN DILFGGGGED TLTGGEGEDT FVLPGELGSI DIINDFNPLE DFLALSGNLT FEDLSFQQQT GLNFRDTLIT INNDRLLAIL VNVPASIISE KDFIDVSQPL LDFDSKYTGN EVL
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