Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3874 |
Symbol | |
ID | 4243537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5990186 |
End bp | 5990968 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638108803 |
Product | HAD family hydrolase |
Protein accession | YP_723385 |
Protein GI | 113477324 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0597322 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTTA CTCCTATCTC TGAAAACGTA GCAAAAACTA GCCTAAAAAA TATTCAACTT ATAGCTACTG ATATGGATGG TACATTAACA AAAAATGGTA AATTTACCTC TGATCTTTTT CTTGCTTTAG AAAAATTAGC GGCAGCAAAA ATTCAGGTAT TAGTAATTAC AGGTCGTTCT GCTGGTTGGG TGCAAGCAAT CAAAAATTAT TTACCTATAG TAGGAGCGAT CGCTGAAAAT GGCGGTCTAT TTTATCCTAT TCATAGTGAA ACACCTCAAT TTTTAATTTC CATACCAAAT ATTACTCTAC ACCGACAAAA TTTAGCCAAT ATTTTCCAAT ACTTAAAAAG TCAATTTCCC CTAATTGAAC CATCTGTTGA TAATCAGTTT AGATTAACAG ACTGGACTTT TGATATACAG AATTTGAGTA TCTCGGAACT AACAAAAATG GCAGATATTT GTCAAAGCAA AGGTTATGGT TTTACCTATA GCACTGTGCA ATGTCATATC AAACCTTTAC AGCAAAATAA AGCAAGTGGA CTATGCAAAA TTATTTCAGA ATACTTCCCT AATTTAACAA CAGAAAAAGT CATTACGGTT GGTGATAGTC CTAATGATGA AAGTCTATTT GAAGAGAGTA AATTTCCTTT TTCAGTGGGA GTAGCAAATA TTCTCGAATA TGCCAATAAA ATAAATCATC AGCCAGTCTA TGTTACTAGT AAAAAAGAAG CAGAAGGTTT TTGTGAATTA GCAGAATTAA TATTAAGTAT TGATCAACAT TAA
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Protein sequence | MPFTPISENV AKTSLKNIQL IATDMDGTLT KNGKFTSDLF LALEKLAAAK IQVLVITGRS AGWVQAIKNY LPIVGAIAEN GGLFYPIHSE TPQFLISIPN ITLHRQNLAN IFQYLKSQFP LIEPSVDNQF RLTDWTFDIQ NLSISELTKM ADICQSKGYG FTYSTVQCHI KPLQQNKASG LCKIISEYFP NLTTEKVITV GDSPNDESLF EESKFPFSVG VANILEYANK INHQPVYVTS KKEAEGFCEL AELILSIDQH
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