Gene Tery_3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3874 
Symbol 
ID4243537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5990186 
End bp5990968 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content32% 
IMG OID638108803 
ProductHAD family hydrolase 
Protein accessionYP_723385 
Protein GI113477324 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0597322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTA CTCCTATCTC TGAAAACGTA GCAAAAACTA GCCTAAAAAA TATTCAACTT 
ATAGCTACTG ATATGGATGG TACATTAACA AAAAATGGTA AATTTACCTC TGATCTTTTT
CTTGCTTTAG AAAAATTAGC GGCAGCAAAA ATTCAGGTAT TAGTAATTAC AGGTCGTTCT
GCTGGTTGGG TGCAAGCAAT CAAAAATTAT TTACCTATAG TAGGAGCGAT CGCTGAAAAT
GGCGGTCTAT TTTATCCTAT TCATAGTGAA ACACCTCAAT TTTTAATTTC CATACCAAAT
ATTACTCTAC ACCGACAAAA TTTAGCCAAT ATTTTCCAAT ACTTAAAAAG TCAATTTCCC
CTAATTGAAC CATCTGTTGA TAATCAGTTT AGATTAACAG ACTGGACTTT TGATATACAG
AATTTGAGTA TCTCGGAACT AACAAAAATG GCAGATATTT GTCAAAGCAA AGGTTATGGT
TTTACCTATA GCACTGTGCA ATGTCATATC AAACCTTTAC AGCAAAATAA AGCAAGTGGA
CTATGCAAAA TTATTTCAGA ATACTTCCCT AATTTAACAA CAGAAAAAGT CATTACGGTT
GGTGATAGTC CTAATGATGA AAGTCTATTT GAAGAGAGTA AATTTCCTTT TTCAGTGGGA
GTAGCAAATA TTCTCGAATA TGCCAATAAA ATAAATCATC AGCCAGTCTA TGTTACTAGT
AAAAAAGAAG CAGAAGGTTT TTGTGAATTA GCAGAATTAA TATTAAGTAT TGATCAACAT
TAA
 
Protein sequence
MPFTPISENV AKTSLKNIQL IATDMDGTLT KNGKFTSDLF LALEKLAAAK IQVLVITGRS 
AGWVQAIKNY LPIVGAIAEN GGLFYPIHSE TPQFLISIPN ITLHRQNLAN IFQYLKSQFP
LIEPSVDNQF RLTDWTFDIQ NLSISELTKM ADICQSKGYG FTYSTVQCHI KPLQQNKASG
LCKIISEYFP NLTTEKVITV GDSPNDESLF EESKFPFSVG VANILEYANK INHQPVYVTS
KKEAEGFCEL AELILSIDQH