Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3776 |
Symbol | |
ID | 4243724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5805541 |
End bp | 5806308 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638108712 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_723296 |
Protein GI | 113477235 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.109684 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGTTA AAATTTTTTC CGCTGTTTTA GTTTTTACTA CAGTTTTTCC TAATCTTACA GCCATTGGTG AAAATATCCA ACATACACAA AGATTATTAT CTAGTAAACA ATGTCCTAAT TGCGAACTAA TAGGTGTTGG TTTGGTATTG GCAAATCTTC AAGGTGCTAA TCTAGAGGGA GCTAATTTAA GTGGAGCTAA TCTCAGTCGT GCAAATTTAA CAGGTGCTAA TTTATCTGGT GCTAATTTGG CTGGTACAAG TTTATTTGGT GCAAATTTAA CAGGGGCAAA TTTATCTGGT GCTAATTTAG CTGGTACAGA TTTAAGAAGT GCTTATTTAA CAGGTGCTAA TTTAACAGAT GTTGACCTAA AAAATGCTTT TTTGTTAGGT GTTGTAGGAA TGCCATCTAA TATAGGTGAA GCTGAAGATT TTTATCGGTT AGGAATTGCA GAAGCAAAGG CAGGAAATTA TAAAGATGCT GTTAGATATT ACAACCAAGC TATTAGTATG AAATCAGATT TAGCAGCTGC TTATTTTGCT AGAAGTATGT CTCTTGCTGA CCTGGGAAAT CTTAATGCAG CTATTGCAGA TGCTCAAAAG TCTCGGGATA TTTTTGTTTC TAAAGGTAGT AAAGAAGGTG AAGAATTATC ACAATATTTG GTTGAAATTA TTGACCTACG TTTGAATCCT CCAAAACCAG AAAAACCTAA TCAATTTGTA CACGCTATTG GTTCTTTACT TCCTGCTTTA TTAAGGTTGG CGTTTTAG
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Protein sequence | MRVKIFSAVL VFTTVFPNLT AIGENIQHTQ RLLSSKQCPN CELIGVGLVL ANLQGANLEG ANLSGANLSR ANLTGANLSG ANLAGTSLFG ANLTGANLSG ANLAGTDLRS AYLTGANLTD VDLKNAFLLG VVGMPSNIGE AEDFYRLGIA EAKAGNYKDA VRYYNQAISM KSDLAAAYFA RSMSLADLGN LNAAIADAQK SRDIFVSKGS KEGEELSQYL VEIIDLRLNP PKPEKPNQFV HAIGSLLPAL LRLAF
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