Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3769 |
Symbol | |
ID | 4243717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5791529 |
End bp | 5791933 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638108706 |
Product | IS630 family transposase |
Protein accession | YP_723290 |
Protein GI | 113477229 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3335] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00644408 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTGTGGTA AAAAAGGGGG AAAAATTTAT GGAGATAGGC AAGGAAAGAG GAGAAAAAGA GAAAACTTAG TCCCTGGTAG AAGAAAAGGA AAAAAAGATT TAATTCCACC AATGATATTC ACAGAAAGTT TGAATACAGA AGATTTTGAA GGCTGGTTAT CAATATATTT ATTACCATCA TTAACCATCA CATCAGTTTT GATTATGGAT AATGCACCAA TTCATCGAAA AACAGTGATT AAACAAATAG TTGAAGATGG AGGTTATCAG GTCATATTCC TCCCTAAGTA TTCTCCTGAT TTGAATAATA TTGAACATAA TTTTAGTGCC TTAAAGAGAG CCAGAATTTA TGCTCATTCA AATACACCCT TAGATGAAAT CATCCGTGAT TATTGTGTAG TTTAA
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Protein sequence | MCGKKGGKIY GDRQGKRRKR ENLVPGRRKG KKDLIPPMIF TESLNTEDFE GWLSIYLLPS LTITSVLIMD NAPIHRKTVI KQIVEDGGYQ VIFLPKYSPD LNNIEHNFSA LKRARIYAHS NTPLDEIIRD YCVV
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