| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3727 |
|---|
| Symbol | |
|---|
| ID | 4243903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 5715997 |
|---|
| End bp | 5716530 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638108670 |
|---|
| Product | RDD domain-containing protein |
|---|
| Protein accession | YP_723256 |
|---|
| Protein GI | 113477195 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0650966 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGACT ATATTGTACC CCAATTGCCA AAAGCTCCTC TATCTCGTCG TGCACTAGCA
TTCAGTATAG ATGCAGGAAT AGTTTGGTTC CTTAGTGCCA TTATTAGTAA TAATTGGTTC
ACATTTATTT TATTTTTTGT GGTATTTTGG ATAGCTATAC GAGTTGTAAT GGTCTACAAA
AATCAAGGTC AGAGCATCGG CCATTTTGCT CTGGATATGA AAGTTTTAGA TAGTAAGTAC
CAAAGAGCTC CTGATATCCT AGAATTATCA AAGCGAGAAG GAATTTTAGC ACTAGCTGGA
TCATTAGCAA TGCTAGGCAT GAGTAATTTG ACATCTGGAA ATGCTGCTGT TTTACTACTA
ATAATGCCCT TGTTTTTAGA TTTTACAGTA GCTTTGGTAG ATATTGAAAG GTATCAGCAA
GCTTTCCATG ACAGAATATC TCATACGATA GTAGTGGGAA CTATGCGTGG TTATTCCCTA
GATATTAAGC TTAGATGGTT ACTTGACGAA GCCAAGCGTT ATATGATAAA ATAA
|
|---|
| Protein sequence | MRDYIVPQLP KAPLSRRALA FSIDAGIVWF LSAIISNNWF TFILFFVVFW IAIRVVMVYK
NQGQSIGHFA LDMKVLDSKY QRAPDILELS KREGILALAG SLAMLGMSNL TSGNAAVLLL
IMPLFLDFTV ALVDIERYQQ AFHDRISHTI VVGTMRGYSL DIKLRWLLDE AKRYMIK
|
|---|
| |