Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3694 |
Symbol | |
ID | 4243869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5672396 |
End bp | 5674945 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638108641 |
Product | glycogen/starch/alpha-glucan phosphorylases |
Protein accession | YP_723228 |
Protein GI | 113477167 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0058] Glucan phosphorylase |
TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.363758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAC CTGTAAATAA ATCTGTAAAC TCTACTACTA AAACTCAAAT TCAAATAGAA GACGATCGCA CAGGCATGAG TGTCAAGACT CTGAGAAGGG CCTTAGCTGA TAATTTATTT TATCTACAAG GGACTTATGA GTCAATGGCA AAAAAGGACG ATTTTTATCG TGCTTTAGCT TATACTATAC GCGATCGCCT ACTCCAACGC TTTCTCTCTA CAATTCGTAC CTACAATGAG AAAGATGTTA AAGTAGTATA CTACCTATCG GCCGAATTCC TCATGGGTCG TCACCTAGGT AATAGTTTAA TTAACCTAGG CATATATGAA GAAATTCGTC AAGCCGTTAG CGAATCTGGA TTGAACTTAG ATGAACTACT AGAACAAGAA GACGATCCAG GTTTAGGAAA CGGGGGTTTG GGTAGGTTAG CAGCTTGTTT TTTGGACTCT CTAGCTACCC TAGAAATTCC CGCTATAGGT CATGGTATTC GTTATGAATT CGGCATTTTC ACCCAAAACA TACAGGATGG GTGGCAAGCA GAAATACCAG ATAAATGGCT GCGCTTTGGA AACCCCTGGG AAATAGCTCG TCCAGGAGAA CAGGTAGAAG TCAAGTTTGG TGGCACCACA GAAGGATATC ATGATGAGAA AGGTAATTAT CGGGTAACAT GGGTTCCAGC TCAAACTGTT GTGGGTATCC CCTATGACAC TCCCGTTCCT GGCTATAAAG TCAATACAGT TAATCCCCTA CGTCTTTGGC GTGCAGAAGC CAGTGTAGAT TTTAAGTTTG AAGAATTCAA TTCTGGAAAC TACGATGGTG CAGTAGCAGA AAAAATGAGT TCAGAGACCA TATCAAAAGT ACTCTACCCG AATGACAACA CTCCCCAAGG TAAAGAACTT CGGCTCAAAC AACAATATTT CTTTGTTTCC TGTGCTTTAC AAGATATTCT CCGCCGGCAT TTATTGCACA ACCAAAACTT AGATAACTTA AGCGATAAAA CAGCAATTCA ATTAAATGAT ACTCACCCTG CTGTTGCTAT TGTGGAAATG ATGCGGTTGT TCATAGATGA GTATGATATT GACTGGGATC GTGCTTGGCA TATTACTCAA CATACTTTTG CCTATACTAA CCATACCTTA TTACCAGAAG CGTTAGAACG GTGGGGGATC ACCTTGTTTG GTAGTTTGCT ACCTCGACAT TTAGAGCTCA TCTATGAAAT TAATCGGCGC TTCATAGAGC AAGTACAAAC TTGGTATCCT AAAGATAAAG AGTTAATCTC TCGTATATCT ATAATTGAGG AAAGCCCAGA AAAAGCAGTG AGGATGGCTA ATTTAGCGAC TATAGGCAGT CATGCGGTCA ATGGGGTAGC AGCTCTACAC ACAGAATTGC TCAAAAAAGG CGTACTTCAA GATTTCTACA AACTTTTCCC AGAAAAGTTC ATGAATAAAA CTAATGGAGT AACCCCCCGT CGTTGGATTT TATTATGTAA TCCTAAACTT TCGGCCTTAT TCTCTGAGAA ACTAGGAGAT AGTTGGTTAC GAAATTTAGA TCAACTCAAG GAACTTGAAA AATATGTTGA TGATGTAGAA TTTTGTAAAC GTTGGCGACA AATTAAGCAG GAAAATAAAG CTAAACTAGC AGAATACATT TTAAAACATA ATCGGATAGA AGTGGATACT AATTCTCTGT TTGATATTCA AGTCAAACGT ATCCATGAGT ATAAACGCCA ACATTTGGAT TTATTCCACA TCATTACTCT TTACAACCGC ATTAAGCAAA ATCCTAAGAT TAATATTCAA CCTCGCACAT TCATTTTTGG TGGCAAGGCA GCTCCTGGTT ACTATATGGC TAAGTTAATT ATTAAGTTGA CTAATGTTGT AGCTGATATA GTTAACAACG ACCCAGATGT GCACGGTCGT TTGAAAGTAG TTTTCTTGGC TAACTTTAAT GCTTCATTAG GTCAGTTAAT TTATCCTGCT GCTGATTTAT CCGAGCAAAT TTCTACTGCT GGCAAAGAAG CATCGGGAAC TGGTAATATG AAGTTTGCCA TGAATGGAGC GATGACTATT GGTACTTTTG ATGGAGCTAA TATTGAGATT CGAGAAGAGG TGGGAGCAGA AAACTTCTTC CTTTTTGGTC TAACTGCTGA AGAAGTTTTT GATTTGAAGG CTAAGGGTTA TCAACCTTTA GATTACTATA ATACAAATTC AGAGTTAAAG GCTGTGATTG ATCGAATTAC TAGTAGTCAG TTTAGCAAAG GTCATCCTAA TTTATTCAAG CCTCTGATTA ACTCTATACT GTACAATGAT CAATATATGC TATTAGCTGA CTATCAGGCT TATATTGAAT GTCAGGAAAA AGTTAGTCAA GTTTTCCAAG ACCCCAAAAA ATGGACAAAA ATGTCTATTT ATAATTCTGT TCGCATGGGT AAATTTTCTT CTGACCGTAC AATTCTTGAG TACGCGAAAG AAATTTGGGG AGCAACACCA GTTAAGATTA ATCAAGGAAA ATATAATCAA AATGATGCTG GTTTGAAAGT AGATAATTAA
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Protein sequence | MNKPVNKSVN STTKTQIQIE DDRTGMSVKT LRRALADNLF YLQGTYESMA KKDDFYRALA YTIRDRLLQR FLSTIRTYNE KDVKVVYYLS AEFLMGRHLG NSLINLGIYE EIRQAVSESG LNLDELLEQE DDPGLGNGGL GRLAACFLDS LATLEIPAIG HGIRYEFGIF TQNIQDGWQA EIPDKWLRFG NPWEIARPGE QVEVKFGGTT EGYHDEKGNY RVTWVPAQTV VGIPYDTPVP GYKVNTVNPL RLWRAEASVD FKFEEFNSGN YDGAVAEKMS SETISKVLYP NDNTPQGKEL RLKQQYFFVS CALQDILRRH LLHNQNLDNL SDKTAIQLND THPAVAIVEM MRLFIDEYDI DWDRAWHITQ HTFAYTNHTL LPEALERWGI TLFGSLLPRH LELIYEINRR FIEQVQTWYP KDKELISRIS IIEESPEKAV RMANLATIGS HAVNGVAALH TELLKKGVLQ DFYKLFPEKF MNKTNGVTPR RWILLCNPKL SALFSEKLGD SWLRNLDQLK ELEKYVDDVE FCKRWRQIKQ ENKAKLAEYI LKHNRIEVDT NSLFDIQVKR IHEYKRQHLD LFHIITLYNR IKQNPKINIQ PRTFIFGGKA APGYYMAKLI IKLTNVVADI VNNDPDVHGR LKVVFLANFN ASLGQLIYPA ADLSEQISTA GKEASGTGNM KFAMNGAMTI GTFDGANIEI REEVGAENFF LFGLTAEEVF DLKAKGYQPL DYYNTNSELK AVIDRITSSQ FSKGHPNLFK PLINSILYND QYMLLADYQA YIECQEKVSQ VFQDPKKWTK MSIYNSVRMG KFSSDRTILE YAKEIWGATP VKINQGKYNQ NDAGLKVDN
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