| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3454 |
|---|
| Symbol | |
|---|
| ID | 4243398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 5279739 |
|---|
| End bp | 5280767 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638108430 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_723019 |
|---|
| Protein GI | 113476958 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGC TAATTATTAT AGTTTTAATT ATTCTTATAG GTTCTGCCCT TTGTTCTGCT
ACTGAAACAG CTTTACTTTC TGTTTCTCCT ATTAAAGTAC AGCAGTTAGC CCAATCTAAA
AAAACAGCAG CATTAGCACT GTGGGTAATT AAGAAAAAAA TTAACCGCCC TATTGCCACT
GTTGTGATTA TTAATAACAT TTTTAATATT GTTGGTAGTA TCTTAATTGG TAATATTGCA
GCCTCAGTTT TTGGAAGTAC TTGGTTAGGA TTTTTTTCAG CTATTTTGAC ATTTTTAGTA
ATAGTTTTTG GCGAAATTAT TCCTAAAACT TTAGGAGAAC GCTATGCCAT GAAATTTTCA
TTAATAATCG CTTTACCTGT AAAAGGTTTA ACTTTTATTT TTACTCCCAT AGTTTGGTTC
ATGGAAAAAA TTACATCACC TTTTACTCAA GGAAAAAAAT TACCTACTAC TAATGAAGCA
GAAATAATGT TTTTGACCAG AATAGGATAT AAAGAGGGAG TTATTGAAGG TGATGAAGCT
GAAATGATTG GAAGAGTATT TCGGCTAAAT GATAAAAGTG CATGGGATAT TATGACACCT
CGAATAGCGA CTACTTATTT ATACAGTGAC TCAATTATAG CTGAGGTAAA ATCAGATATT
ATTAGTTCTC AACATAGTCG AATTATTGTC ATAAGAGATT CTATTGATGA TGTAGTTGGC
ATGGTTTTAA AAAATGAATT ACTTAAAGGC ATAATTGAAG GAAAGGAGAA TCAAAAAGTT
GCTGACTTTA TGCGAGATAT TAGATTTATT CCAGATACAC TGAGAGTAGA TTTCTTATTA
AAAGAATTTC AGAAATATAG TCAACAGTTG ATGGTTGTTT TAGATGAATA TGGAGGAGTT
TCAGGAGTGG TGAGCCTAGA AGATGTATTA GAAGAATTAA CTGGTGAAAT TGTGGATGAA
ACAGATCAAA GTGTTGACTT ACAAATTGTG GCAAGAATGA GAAGAAAGAT CAAATTAAAG
GATAAGTAA
|
|---|
| Protein sequence | MLKLIIIVLI ILIGSALCSA TETALLSVSP IKVQQLAQSK KTAALALWVI KKKINRPIAT
VVIINNIFNI VGSILIGNIA ASVFGSTWLG FFSAILTFLV IVFGEIIPKT LGERYAMKFS
LIIALPVKGL TFIFTPIVWF MEKITSPFTQ GKKLPTTNEA EIMFLTRIGY KEGVIEGDEA
EMIGRVFRLN DKSAWDIMTP RIATTYLYSD SIIAEVKSDI ISSQHSRIIV IRDSIDDVVG
MVLKNELLKG IIEGKENQKV ADFMRDIRFI PDTLRVDFLL KEFQKYSQQL MVVLDEYGGV
SGVVSLEDVL EELTGEIVDE TDQSVDLQIV ARMRRKIKLK DK
|
|---|
| |