Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3342 |
Symbol | uvrC |
ID | 4243513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 5124169 |
End bp | 5126037 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638108327 |
Product | excinuclease ABC subunit C |
Protein accession | YP_722918 |
Protein GI | 113476857 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.991937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAACTC AAATTTTACC TATAATAAAA GACTCTGAAC GTTTAGAAAA TAGACTCAAA GAGATTCCCC AAACTCCGGG AGTTTATCTC ATGCGTGATC GTAGCGATCG CATCCTTTAT ATTGGTAAAT CTAAAAAACT TAGAAACCGA GTTCGTTCCT ATTTTCGAGA TGGAAAAAAT CACACTCATC GTATCAGTTT AATGATACAA CAAATCGTTG AAATTGAATT TATTGTCACA GATACAGAAG CTGAAGCTTT AGCATTAGAA GCTAATCTTG TTAAGCAACA TCAACCATAT TTTAATGTCT TACTCAAGGA TGATAAAAAA TATCCCTATC TTTGTATAAC TTGGTCGGAA GATTATCCGA GAATTTTTAT TACTAGAAAA CGCAGATTAG GTAAAGCTAA AGACCGTTAT TATGGTCCTT ATGTGGATAC TAGATTACTC CGAAATACTC TACATTTAGT TAAACGAATT TTTCCCCTAC GTCAAAGACC AAAACCTTTA TTTAAGGACC GCTCTTGTCT GAATTATGAT ATTGGTCGTT GCCCTGGAGT TTGTCAGGAG TTAATTACTC CAGAGGAATA TCATAAAATT GTGCAAAGAG TGGCAATGAT TTTTCAAGGT CGAACTGGAG AATTAATTGA TATTTTAAAT ACTCAAATGG AAAAAGAAGC GGAAGCGCTA AATTTTGAAA AAGCAGCATT TATTCGTGAC CAAATTAGAG GTTTAAATTC TTTAAATGCT GATCAAAAAG TTTCTTTACC AGATGATAGA GTTTCTAGAG ATGCAATTGC TTTGGCGGGA AATCATCAAA TTGCTTGTGT TCAACTATTC CAAATTCGGG CAGGAAAATT AGTAGGTAGG TTGGGATTTA TTGCTGAAAT TCCTGATTTA GGAACTGCAG AAAATCAGGA GTTGGGAGTA ATTTTGCAGC GGGTTTTAGA ATCCCATTAT CAAATAGTAG AATCTGTAGA AATTCCTACG GAAATTATTG TGCAAAATGA GTTGCCGGAG AGTAATTTTT TGCAAAATTG GTTAACAGAA AAGAAGGGTA AAAAAGTAGA AATTTTTGTA CCTCAACGCC AGGGGAAAGC TGAATTAATT GAGATGGTAA AAAAGAATGC TGAGTATGAG TTATTGCGGT TGGCAAAAAT GAGCGATCGC AATAATGAAG CGATGACAGA TTTAGCAGAA ATCTTAGATT TACCAGAGTT ACCTCACCGG ATAGAGGGTT ATGATATTTC CCACATTCAA GGTTCGGATG CGGTGGCATC ACGGGTAGTG TTTATTGACG GTTTGCCAGC AAAACAACAT TATCGACATT ATAAAATTAA AAACCCAGAA GTGCGTTCCG GTCATTCTGA TGATTTTGCC AGTATGGCTG AGGTTATTGG GCGACGGTTT CGTGACTATG AAAAACAAAC TACTACAGAC AAACCAGATT TAATTATGAT AGATGGTGGG AAAGGGCAAC TGTCAGCAGT AGTGGCAGTG ATGGAAGAGA TGAATATATT AGAAGAAGTG CGGGTGGTGA GTTTGGCAAA ACAACGGGAG GAGATTTTTT TGCCTGGGGA GTCTGAACCT TTAAGAACTG ATGCGGAACA ACCGGGGGTG CAGTTGTTGC GGAGGCTGCG GGATGAGGCT CATAGATTTG CTGTGAGTTT TCATCGGGAT AGAAGAAGTC AGAGGATGAA GCGATCGCGT TTAGATGAGA TTCCTGGTTT AGGGCAACAT CGACAAAAGT TGTTATTGGG GCATTTTCAT TCTGTTGATT ATATTAGGAT GGCAACGGTG GAACAGTTGG CAGAAGTGTC GGGAGTCGGA CCTAAGTTGG CACAACAGAT TTATGATTAT TTTCATTAA
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Protein sequence | MITQILPIIK DSERLENRLK EIPQTPGVYL MRDRSDRILY IGKSKKLRNR VRSYFRDGKN HTHRISLMIQ QIVEIEFIVT DTEAEALALE ANLVKQHQPY FNVLLKDDKK YPYLCITWSE DYPRIFITRK RRLGKAKDRY YGPYVDTRLL RNTLHLVKRI FPLRQRPKPL FKDRSCLNYD IGRCPGVCQE LITPEEYHKI VQRVAMIFQG RTGELIDILN TQMEKEAEAL NFEKAAFIRD QIRGLNSLNA DQKVSLPDDR VSRDAIALAG NHQIACVQLF QIRAGKLVGR LGFIAEIPDL GTAENQELGV ILQRVLESHY QIVESVEIPT EIIVQNELPE SNFLQNWLTE KKGKKVEIFV PQRQGKAELI EMVKKNAEYE LLRLAKMSDR NNEAMTDLAE ILDLPELPHR IEGYDISHIQ GSDAVASRVV FIDGLPAKQH YRHYKIKNPE VRSGHSDDFA SMAEVIGRRF RDYEKQTTTD KPDLIMIDGG KGQLSAVVAV MEEMNILEEV RVVSLAKQRE EIFLPGESEP LRTDAEQPGV QLLRRLRDEA HRFAVSFHRD RRSQRMKRSR LDEIPGLGQH RQKLLLGHFH SVDYIRMATV EQLAEVSGVG PKLAQQIYDY FH
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