| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3292 |
|---|
| Symbol | |
|---|
| ID | 4243598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 5050039 |
|---|
| End bp | 5050533 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 638108282 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_722873 |
|---|
| Protein GI | 113476812 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.948121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00586872 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGGATGAGA CGTTAAAGAA AAATGTACCT ATTGCTTTAG CGATCGCTAC GGAAAAAGCT
AGTTCCGAAT TAATAATTAT TAATATTTTG TTGGAGATTA AAAGACAACT TCAAATCAGT
TTTTTCTCTG GTATAGATTT CTCAGTTGAT AAGGATAAAG GGTTGAATGA ATTTTGTGAT
TTTATTATTA GTCAATCTCC GAAACAATTA TATTTAGATA CTCCTGTAGT TGTTCTTGTA
GAAGCTAAAA GTGAAAATAT TGTTAGTGTT TTAGGAAAAT GTATTGCAGA AATGGTTGCT
GTAGAAATAT ATAATAAACA AGATGGTAAA GATGTTTCTT TTATTTATGG TGTAGTGACT
ACTGGTTATG TTTGGAAATT TTTGAAATTG GAAAAGAATG TAGTGTTTAT TGATGCAGAG
AATTACTATA TTAAAAATTC GAGAAAGATT ATTAGAATTT TTGTGGAAAT GGTTAGTTCA
ATTAAGTGTT TGTAA
|
|---|
| Protein sequence | MDETLKKNVP IALAIATEKA SSELIIINIL LEIKRQLQIS FFSGIDFSVD KDKGLNEFCD
FIISQSPKQL YLDTPVVVLV EAKSENIVSV LGKCIAEMVA VEIYNKQDGK DVSFIYGVVT
TGYVWKFLKL EKNVVFIDAE NYYIKNSRKI IRIFVEMVSS IKCL
|
|---|
| |