| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3238 |
|---|
| Symbol | |
|---|
| ID | 4243659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4955862 |
|---|
| End bp | 4957973 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638108235 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_722826 |
|---|
| Protein GI | 113476765 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0438] Glycosyltransferase
[COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTAG AATTAAAAGA TTGGGAACTA TGGGTAAATG AAAAACTAGC CCAAAAACCA
AAAAATACAC CAAGCTTACA GGGAAGTGTC AAGCCAGTTT TATTCATTCT CCATGATATT
ACTTCAGCGG GGGCACAGCT ATTTTTAGTT AGGCTTTTAG AATGGATAGG TCAACATGAA
CCTACTATGT CTAAAGAAGT GCTGATCGAT ATTTCACGCT CGGATATTGG TAATTATGGA
GAGCAAGGAA ACTTTGTTTT AGAGCGGGTA AAAAAATGTG GCGAAGTCCA TTTTATTGAT
TCAAATAGTG GACTTCCTGA AAATATTGCT GCTATTCGCT CTGGTTTTTA CTCTTTAATT
TATGTTAATA CCTGTGTTTT AGGAGCGTTG CTAGATTCTA TCAGAAAAAT TCCTAGTCCT
ATTATTGTTC ATGTTCACGA ATTAAAATTT TGGATTAGTA ATAGGCTAGG TATGGATAAC
TTTAATCGTT TATTGAAGTA TGATCCTCGT TGGATTGCTT GTTCTAATGC CGTTCAAGAA
AGTTTAGTTA ATTACTGTCT TGTTTCTCCT AAAAAAGTTG ATGTTATTCA TGGGTTTATT
CCTTCTGAGA AACTACTTAT TTCTCAAGTA AAAACTCCCC AACAAATGAG GAAAGAGTTA
AGTATTTCAG AAGATACTTT TGTTATTGCT TGTTGTGGAA CTTTAGATTG GCGAAAAGGA
GGGGATTTAA TAGTTCCTTT GCTAGTTATT TTGAAAAAAA AATTATCCCC AGAAAAAAAG
TTTGTTTGTA TCTGGGTTGG TAACTGGGAC AGCCAACTTT CTCAGCTAGA AATTGAATAT
ACAGTCGAAA AGGCTGAGTT GGAAAACAAT ATTATTTTTA CAGGGTATCA GAAATCTCCT
CTGAATTATA TGAGTTGTGC CGATGTTTTC TTACTTCTTT CTCGGGAAGA TCCTTTTCCT
TTGGTAATGA TGGAAGCAGG GGTTTGTAAA CTTCCAGTGG TAGGGTTTGA TGGTTCTGGT
GGAGCAACTG AGTTTGTTGA GTCAGAGGCA GGGTTACTTG CTCCTTACTT AAATTTGGAA
GTAATGGCGG AAAAAATAGC TATACTTTAC AATAATACCA GTCTTAGGAA AGAAATGGGA
GAAAATGCTT ATCGAAAGGT TAATGAACTT TATAACGAAA CTGTTTCTGC ACCGAAAATA
TTACAATTAA TTCAATCTTT AGTTCATAAG TCGAGTGAAA CGACTGTAAC TTTTAAGGAT
TTTGTACCTA GAGTTTCAGT CATAGTTCCT AACTATAATC ATGCTCCCTA TCTCCGTAAA
CGTTTAGATT CAGTTTATAG TCAGACTTAT ACTGATTTTG AAGTAATTTT ACTAGATGAC
TGCTCTAGCG ATAATAGTAG AGACATTTTG GCTTCTTATA AGGAAGAAAA ACCTAATACT
ATTTTTGTTC CTAACGAATC TAATAGTGGC TCAGTTTTCC GTCAGTGGGA AAAAGGGGTA
TCTTTGGCTC GTGGTGAGTA TATTTGGATT GCTGAATCTG ATGATTTTGC CTCTCCTGAT
TTTCTGAAGC AGTTAGTAAC TGTTATGGAC GAGCATCCAG AAGTTGGATT AGCATATTCC
CAATCTTGGT TAGTTGATAG TCAAGATGTT GTTTCTGGAG ATGCTAGTTG TTGGACTAAT
GATTTAGATA GTCAGCGCTG GTCTCAAAGT TTTATTAATG ATGGGAGGGA TGAGATAGTT
AGATTTCTGA TTTACAAAAA TACGATTCCT AATGCTAGTG CGGTTTTAAT TCGTAGAAGT
GCATTGAAAA AATGTGGCGG TGTTATTGAG AAATCTTTTA GATTGTGTGG AGATTGGCTA
CAATGGATGA AAATTTTGTC TTGCTCTGAT GTTGGATTTG TGTCAGAATG TTTAAATTAT
TGGCGGCAAA ATACCTCTAA TGCTAGAGTT AAGAGCGCGG GTACTTTAGA ATGGACCGAG
GGAGAGCAAG TTTTGAGTTA TATTTGTGGT TTGTTAAATT TGCCTGAAGA ACAAAAAGAC
AAAATTCTTC TGTCTTTTAT CCGCAGATGT TGGCAGTGGC AAAGAGAATT TATTGAAAAG
ACTTATAATT AG
|
|---|
| Protein sequence | MNLELKDWEL WVNEKLAQKP KNTPSLQGSV KPVLFILHDI TSAGAQLFLV RLLEWIGQHE
PTMSKEVLID ISRSDIGNYG EQGNFVLERV KKCGEVHFID SNSGLPENIA AIRSGFYSLI
YVNTCVLGAL LDSIRKIPSP IIVHVHELKF WISNRLGMDN FNRLLKYDPR WIACSNAVQE
SLVNYCLVSP KKVDVIHGFI PSEKLLISQV KTPQQMRKEL SISEDTFVIA CCGTLDWRKG
GDLIVPLLVI LKKKLSPEKK FVCIWVGNWD SQLSQLEIEY TVEKAELENN IIFTGYQKSP
LNYMSCADVF LLLSREDPFP LVMMEAGVCK LPVVGFDGSG GATEFVESEA GLLAPYLNLE
VMAEKIAILY NNTSLRKEMG ENAYRKVNEL YNETVSAPKI LQLIQSLVHK SSETTVTFKD
FVPRVSVIVP NYNHAPYLRK RLDSVYSQTY TDFEVILLDD CSSDNSRDIL ASYKEEKPNT
IFVPNESNSG SVFRQWEKGV SLARGEYIWI AESDDFASPD FLKQLVTVMD EHPEVGLAYS
QSWLVDSQDV VSGDASCWTN DLDSQRWSQS FINDGRDEIV RFLIYKNTIP NASAVLIRRS
ALKKCGGVIE KSFRLCGDWL QWMKILSCSD VGFVSECLNY WRQNTSNARV KSAGTLEWTE
GEQVLSYICG LLNLPEEQKD KILLSFIRRC WQWQREFIEK TYN
|
|---|
| |