Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3218 |
Symbol | |
ID | 4243813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4924188 |
End bp | 4925303 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638108218 |
Product | periplasmic solute binding protein |
Protein accession | YP_722809 |
Protein GI | 113476748 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0863891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.580114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTA GTAGATATCT GTTCCAAATT AATTTAACTA ATAATGCAGT GAGAAAAGGC TTCACTCGGA ACAGGAAACA GGAAATATAT CTGAGTGGTA AATACACAAA TAATTTGGCC TACCTGCTTA ATATTTCTAC TCAAGATTTG AAAAATACAA TTTGGTCAAT GTTAGGAATT TTATTAGGAT TATGGATAAG TGGTTGTGCT GCCCCATCTT CAAATATTTC CCCTGAGAGT GAGAATAAAC TCTTAGTAGT CTCTACAAGT ACGATCATTG CTGATATGAC AGAAAAAATA GGTGGAGATG AAATTGAGCA TCAGGGAATT ATTAAACCAG GGGCTGACCC TCATATTTAT GAACCTGTTC CTACTGATAG TGTGGCTTTT GAGAAAGCAG ATTTAATTAT TTATAATGGC TATAATTTGG AACCTACTTT AATTAAACTT ATGAATGCTG CGGGTATAAA GGCTCAAAAG TTGGCGGTGG GGGAAAAGGT GAAGCCTTTA CAAAATTTGG GTAAGGGGGA GTTAGTGCCA GATCCTCATG TTTGGGGTGA TGCGGAAAAT GGAATTGTAA TGGTGAAAGG TATTCGGGAT GCTTTAATTG AGTTGTCACC GGAAGATAAA GAGGTGTTTA TGGAAAATGC TGCCAAATTA GTTGAGGAGT TAGGGCAGGT TGATATTTGG ATCATGGAAC AAATAGGAAC TATTCCGGAA GGTCAGCGCC GACTGGTGAC TACCCATGAT GCTTTTGAGT ATTATGCGAA AGCTTATGGT TTAGAGATGA CTGGAACTTT GATTGGGATG AGTACGGAGG AGCAACCTAG TGCGCAGACT GTAAAAAATT TGGTGAAGGA AATTAAGAAA AGTGGAGTAC CTGCTATTTT TGCGGAGACT ACTATTAATC CTAAGTTGAT TACTACGGTA GCTCAGGAAG CTGGGGTACG GTTAGCTCCT AGGGAGTTAT ATTCTGATTC TATTGGGGCT CCAGGGAGTG AGGGAGATAG TTATACGAAA ATGTTGGTGT CTAATACTCA GGCAATAGTT GAAGCTTTGG GTGGGGAATA TACAGCTTTT GAGTTACAAA TAACTGGAAC TTTAGAAAAA AATTAA
|
Protein sequence | MKISRYLFQI NLTNNAVRKG FTRNRKQEIY LSGKYTNNLA YLLNISTQDL KNTIWSMLGI LLGLWISGCA APSSNISPES ENKLLVVSTS TIIADMTEKI GGDEIEHQGI IKPGADPHIY EPVPTDSVAF EKADLIIYNG YNLEPTLIKL MNAAGIKAQK LAVGEKVKPL QNLGKGELVP DPHVWGDAEN GIVMVKGIRD ALIELSPEDK EVFMENAAKL VEELGQVDIW IMEQIGTIPE GQRRLVTTHD AFEYYAKAYG LEMTGTLIGM STEEQPSAQT VKNLVKEIKK SGVPAIFAET TINPKLITTV AQEAGVRLAP RELYSDSIGA PGSEGDSYTK MLVSNTQAIV EALGGEYTAF ELQITGTLEK N
|
| |