| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3075 |
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| Symbol | |
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| ID | 4244725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 4731692 |
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| End bp | 4734034 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638108097 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_722690 |
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| Protein GI | 113476629 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | [TIGR03032] conserved hypothetical protein TIGR03032 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATG AAACTGATAC TCCTGTTAAT ACCGACAATT ATTTATTAAG AAGCGTACAT
ACAAACAATT TCCCTAAAAT TTTAGATCAG CTAGGCATAT CTTTAGTTGT TTCTACTTAT
CAAGCAGGTA AATTAATTGT ATTGCGTGCC GATAATGGAG TAATTAATAC TCACTTTCGA
GCCTTTAAGA AACCTATGGG ATTAGCAGTA ACTAACGAAA AAATTGCTCT GGGAACTGCT
TATAAAATTT GGGATTTTCG TAACGTTCCA GCAGTAGCAG AGAAAATAGA ACCCCAAGGG
AAATATGATG CTTGTTATTT ACCAAGAAAT ATTCATATAA CTGGAGATAT TGATATCCAC
GAAATGGCTT GGGTGAAAGA TGAATTATGG TTTATTAATA CTCGTTTTTC TTGCCTTTGT
ACTCTCGGTC ATCCTAATAG TTTTGTGCCC AGATGGCGAC CTCCTTTTGT CACTGGATAT
GACTTAACAG ACCGGTGTCA TTTAAATGGA TTTTGTTTAA AAAATGACCT ACCAAAATAT
GTCACAGCTT TAGGAGAAAC TGATACTGCT GCTGGTTGGA GAAAGAATAA AGCTAATGGG
GGAATATTAA TAGATATAGA AACAAATGAA GTATTAATTC GGAACTTATC TATGCCTCAT
TCTCCTAGAT GGTATCAAGA ACAATTATGG TTATTAGAGT CTGGTAATGG TAGTCTGGCA
AAAGTTGATT TAAACCAGAG AAAATTACGA ACAATTGCTA AATTACCAGG GTTTACTCGC
GGTATAGATT TTTGGGGAAA TTTAGCATTT ATTGGTTTGT CTCAAGTTCG AGAAACTGCT
GTTTTTACGG GTATGCCTAT TACTGAACTT CAAGAAAGAA TTTGTGGGGT TTGGGTGGTA
AATATTTTAA CTGGAGAAAC TATCGCTTTT TTAAGATTTG AAGCTGGAGT TCAAGAAATT
TTTTCTGTGG CAGTTTTGCC TAATATTCGC TTCCCAGAAA TTATTGAATG GGATGAAAAT
TTATTAGCAA ATTCCTATGT TTTACCTGAT GAAGCTTTAG CAGAAACAAT CAAAACAACT
GTAGAAATAG CTATGGCAGA AACTCATTTA CTTAAAGGAA ATAAATTATA TCAAAAAGGT
GAATTAGTAG AAGCGATCGC TGCATATCAA GAATGTTTGA AGTTACAACC AGATTTGACA
ATAGCGAAAT ATAATTTGGG AGTTGCTTTA GGAGATAATC AACAATATGA AGCAGCAATT
AATGTTTTAG AACAGGTAAT TAATACAGAA CCAGATAATG CCGATGTTCA AAATAGTATT
GCTTATGCTT ATAGTCAAAA AGGTGAATTA CACAAAGCAA TTAAACATTA CGAAAAAGCA
ATTTATCTCA ACGGTAATTT TGCCAAAGCA CATTTTAATT TAGGCATAAC TTTGTTAAAA
AATGGAGATT TAAAACGAGG ATTTGCAGAA TGTGAATGGC GCTGGCAAAC AGGACAATTT
ACACCCTTTC AATGTCCTCA TCCACGATGG AAAGGGGAAG ATATTAGCAA TAAAATTTTA
TTAATTCATA CTGAGCAAGG AGCAGGAGAT GCTATTCAAT TTATCCGTTA TGTTCCTTTA
GCAGCAAAAC TTTGTCAAGG TATTATATTG GTCTGTCTAC CAGAGTTAAT TCCTCTATTT
AAAAATATCC CAGAGATTGA TAAATTAATG CCACCAGGAG AACTAAAATT ATCAGAGTTT
GATATCTATG TACCCTTAAT GAGTTTACCC TATATTTTCG GCACAACTTT AGAAACAATT
CCTGCCAATA TTCCCTATCT TCAATCTACA AATAGCAACC CCATAAATCT TACTAATACT
CAATATAAAG TAGGCATTGT TTGGAGTGGT AGTTCTACTC ATAAAAATGA TGGTAATCGT
TCTTGCAAAA TCACAGACTT TTTACCTATT TTACAGGTAC CAGGAGTCAA ATTTTATAGT
CTACAAAAAG GAGAAAATAG GCAAGAATTA ACTCAAGTTC CCAGTAATAT TCAGATAGAA
GATTTAAGTT ATCAGTTAAA CAATTATGCT GATACAGCAG CAGTAATAGA GCAACTAGAT
TTAGTAATTA CTGTTGATAC TTCTGTGGCA CATTTAGCAG GAGCATTAGG TAAAAATGTA
TGGAATTTAT TATGTTTTAA TCCGGACTGG CGTTGGTTAC AAGAAGTTGA AGATACTCTT
TGGTATCCAA CCATGAAATT ATTCCGTCAG TCTCAGTCAA GAAAGTGGCA AGAAGTTATT
GAAAAAGTTC AGGAACATTT GTGGAAAATT ATCACAGGAA ACATGATTAT TAGTAATAAG
TAA
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| Protein sequence | MNNETDTPVN TDNYLLRSVH TNNFPKILDQ LGISLVVSTY QAGKLIVLRA DNGVINTHFR
AFKKPMGLAV TNEKIALGTA YKIWDFRNVP AVAEKIEPQG KYDACYLPRN IHITGDIDIH
EMAWVKDELW FINTRFSCLC TLGHPNSFVP RWRPPFVTGY DLTDRCHLNG FCLKNDLPKY
VTALGETDTA AGWRKNKANG GILIDIETNE VLIRNLSMPH SPRWYQEQLW LLESGNGSLA
KVDLNQRKLR TIAKLPGFTR GIDFWGNLAF IGLSQVRETA VFTGMPITEL QERICGVWVV
NILTGETIAF LRFEAGVQEI FSVAVLPNIR FPEIIEWDEN LLANSYVLPD EALAETIKTT
VEIAMAETHL LKGNKLYQKG ELVEAIAAYQ ECLKLQPDLT IAKYNLGVAL GDNQQYEAAI
NVLEQVINTE PDNADVQNSI AYAYSQKGEL HKAIKHYEKA IYLNGNFAKA HFNLGITLLK
NGDLKRGFAE CEWRWQTGQF TPFQCPHPRW KGEDISNKIL LIHTEQGAGD AIQFIRYVPL
AAKLCQGIIL VCLPELIPLF KNIPEIDKLM PPGELKLSEF DIYVPLMSLP YIFGTTLETI
PANIPYLQST NSNPINLTNT QYKVGIVWSG SSTHKNDGNR SCKITDFLPI LQVPGVKFYS
LQKGENRQEL TQVPSNIQIE DLSYQLNNYA DTAAVIEQLD LVITVDTSVA HLAGALGKNV
WNLLCFNPDW RWLQEVEDTL WYPTMKLFRQ SQSRKWQEVI EKVQEHLWKI ITGNMIISNK
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