| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3038 |
|---|
| Symbol | |
|---|
| ID | 4244922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4688863 |
|---|
| End bp | 4689375 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638108069 |
|---|
| Product | cytidyltransferase-like protein |
|---|
| Protein accession | YP_722662 |
|---|
| Protein GI | 113476601 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02199] rfaE bifunctional protein, domain II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00756978 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCCC AAAAACTAAT TTCTGGCCTA TACAATTTAA CTGAACTAGA ACAACTAATT
AATTCTCAAG CAACTTTTTG GCGACCTTTA GTATTTACAA ATGGGTGCTT CGACTTAATT
CATGCTGGAC ATGTTCGTTA TTTGTGGGCA ACTAAGTCTC TAGGGCGATC GCTTATAGTA
GGATTAAATA GTGATTGGTC AGTGCAAAAT CTTAAACCCC AAAAAGAGGG ATACCCAATG
CGACCAATTA TACCACAAAC CCAACGGGCT GAAGTTTTAG CAGCTCTCAA ACCGGTTGAT
GGAGTAGTAA TTTTTAATGA AACTACTGCT ACTAAAATAA TAGAACGACT TAAACCTGAT
ATTTATGTTA AAGGTGGCGA TTATTCTGTT GAAACATTAC CAGAAGCTCA AAAAGTAAAA
AATTATGGTG GTAAAGTATC TATAATTCAA ATAGAAGTGC CAACTTCTAC TACTGGAATT
ATTAATAGTA TTTTACCAAA AAATTCGGTT TAA
|
|---|
| Protein sequence | MDSQKLISGL YNLTELEQLI NSQATFWRPL VFTNGCFDLI HAGHVRYLWA TKSLGRSLIV
GLNSDWSVQN LKPQKEGYPM RPIIPQTQRA EVLAALKPVD GVVIFNETTA TKIIERLKPD
IYVKGGDYSV ETLPEAQKVK NYGGKVSIIQ IEVPTSTTGI INSILPKNSV
|
|---|
| |