| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3011 |
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| Symbol | rplD |
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| ID | 4244895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 4657692 |
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| End bp | 4658330 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638108046 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_722639 |
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| Protein GI | 113476578 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00787083 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGTTGATT GTGTAGTAAA AAACTGGCAA GGTGAAGAAG TTGGGCAAGC AACTCTCAAC
TTACGTGTAG CTAAGGAAGA AAGTGCCGCA CATATTGTTC ACAGATCCCT AAGACTACAA
ATGGCAAATA ATCGCCAGGG AACAGCTAGT ACCAAAACTA GATCCGAAGT AAGAGGTGGT
GGTCGTAAAC CTTGGCGGCA AAAAGGAACA GGTAGAGCAA GAGCAGGTTC AATTCGTTCT
CCCCTATGGC GTGGTGGTGG TGTAATTTTT GGTCCTAAAC CAAGAGACTA TTCCCATAAA
ATGAACCGAA AGGAAAAACG TCTAGCACTT AGTACTGCTT TCCAAAGTCG CTCAGAAGAC
TTAATAGTTA TAGAGGACTT AAGCGAACAA TTTACTAAAC CAAAAACTAA AGAATTGGTG
CAAGCGATCA CTCGCTGGGG AATAGATATA CAAGCTAAAA TTGTGTTAGT TTTGCCAGAA
AAACAGGAGA ACGTTTATTT ATCAGGTCGT AACATTGCCA AGCTAAAAAT TATCCTAGCC
AACAATTTGA ATATTTACGA TATTCTAGCA GCAGACAAAA TCATAGCAAC TGTAACAGCA
ATTGCTAAAA TTCAGGAGGT CTACGGGAAT GAAACTTGA
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| Protein sequence | MVDCVVKNWQ GEEVGQATLN LRVAKEESAA HIVHRSLRLQ MANNRQGTAS TKTRSEVRGG
GRKPWRQKGT GRARAGSIRS PLWRGGGVIF GPKPRDYSHK MNRKEKRLAL STAFQSRSED
LIVIEDLSEQ FTKPKTKELV QAITRWGIDI QAKIVLVLPE KQENVYLSGR NIAKLKIILA
NNLNIYDILA ADKIIATVTA IAKIQEVYGN ET
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