| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3000 |
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| Symbol | rplE |
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| ID | 4245116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 4652002 |
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| End bp | 4652547 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638108035 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_722628 |
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| Protein GI | 113476567 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.414556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00644408 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCAGATA CACTCAAGAA ATACTATTAC AAAAAAATTG TTCCTAAACT AATTGACCAA
TTTAAGTATA AAAATATTCA CCAAGTACCT AAGCTGGTAA AAGTAACAAT TAATCGTGGT
TTAGGGGAAG CATCTCAAAA TGCTAAAGCT TTAGATTCAT CTATAAAGGA AATAGCTACA
ATTACAGGTC AAAAACCAGT AGTAACTAGA GCAAAAAAAG CGATCGCTGG ATTTAAAATC
CGTCAAGGAA TGCCAGTAGG AGTAATGGTG ACTCTTCGTT CTCAGAGAAT GTATGAGTTT
ATAGAGCGAC TAATTAACTT AGCATTACCT AGAATTCGAG ATTTTCGAGG CATAAATCCT
AAAAGCTTTG ACGGTCGAGG CAATTATAGT CTAGGTGTCA AAGAACAACT AATTTTTCCA
GAGATAGAAT ATGACAAGAT CGATCAAATT CGAGGAATGG ACATTTCAAT TATTACCACA
GCTAAAACTG ATGAAGAAGG CCGTGCCCTA CTTAAAGAAA TGGGAATGCC CTTCCGGAGT
AATTAA
|
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| Protein sequence | MSDTLKKYYY KKIVPKLIDQ FKYKNIHQVP KLVKVTINRG LGEASQNAKA LDSSIKEIAT
ITGQKPVVTR AKKAIAGFKI RQGMPVGVMV TLRSQRMYEF IERLINLALP RIRDFRGINP
KSFDGRGNYS LGVKEQLIFP EIEYDKIDQI RGMDISIITT AKTDEEGRAL LKEMGMPFRS
N
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