Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2995 |
Symbol | rplO |
ID | 4245111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4649017 |
End bp | 4649502 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638108030 |
Product | 50S ribosomal protein L15 |
Protein accession | YP_722623 |
Protein GI | 113476562 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0200] Ribosomal protein L15 |
TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.526656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0562332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTAA AAGATGCAAT TCCAAAAAAA GGTTCCCAAC AGCGCGGTCG TAGAGTTGGC CGGGGAATCT CAGCAGGTCA AGGTGCAAGT TGTGGTAAAG GGATGCGCGG TCAAAAATCT CGTTCTGGTG GCAGTACTAG ACCAGGTTTT GAAGGAGGCC AAAATCCCCT ATATCGTCGC TTGCCAAAAT TAAAAGGTTT TCCGATGGTA AATCGGAAAA AATACACGAT TATAAATGTT AGTAAGTTAT CATCATTACC AGCTAACACT GAGGTAACTC TTGCTTCCCT GATTAAAGTT GGAATTATTA CTACGGATGA TGGTCCACTT AAAATCTTAG GAGATGGAGA CTTAAACATT CCACTTAAGG TTTATGCAGC AGCTTTTACA GCTTCAGCTC GGAGCAAAAT AGAAGCAGCA GGTGGTAGTT GTGAAGAAAT TGGCCCTGCT CAAGCTGTCT CTAATGAGGA TTCAACAAAG GAGTAA
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Protein sequence | MRLKDAIPKK GSQQRGRRVG RGISAGQGAS CGKGMRGQKS RSGGSTRPGF EGGQNPLYRR LPKLKGFPMV NRKKYTIINV SKLSSLPANT EVTLASLIKV GIITTDDGPL KILGDGDLNI PLKVYAAAFT ASARSKIEAA GGSCEEIGPA QAVSNEDSTK E
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