| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2953 |
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| Symbol | |
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| ID | 4245295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 4588813 |
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| End bp | 4590948 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638107991 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_722588 |
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| Protein GI | 113476527 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0781794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTT CTAAGACAGC CATCTTAACC CTTACTGCCC TCAGTTCCCA AAATTTAGCT
ACAGAGGCAA AAGTTACTCC TAATACTAAT CCATATTTTC AGACAACTGC ACCAGAGAAT
ATTAATCTTA CTAACTCTAT TAATGTTATT ACTGTGCCTT CCACAAAATC AATTAGCCCC
CCAGAAATAT TAGTCAGCCA AGCCTATAAT AACCTTAACC TTAAGACTAC TTTATCAACT
CCAAATATAC ATCAAATTAA AAGAACTTTA AACAATAGTT GGTTAGGGAA AATAGTAAAG
TTTTCAGCAA AAAATAATTA TCAATTCCAG CAATTTGCTG AACAAATGGC TTTAAAAACA
GATTTAGAAT CAGAAGCTAG TCTCAATCTT AATCCTACCC TAACTTTATT GAATACTTTA
TTATTAGTTG CAACTTTATT ACCTCCTATA ACTATAGGTT TTTTTTGGCT CATCAGAAGA
TTGGTAATTA AAGAATTAGT AGGTGAAGTT AATAAGAGGT TAACAAAAAT AAGTCAATTA
GAATTAAGTC TGAATCAATC TCAAAAATTA TTTACTGAAT TAGAGAGTCA TATAGTGACT
GCAAAACAAT CAATTGATTT TCTGCATCAA GAAGCTAAGA TATCAAAATC ATCTGTAGAA
CAAATAGAAG TTCTGAAGTC TCAGTTTTTA ATGCAACTGC AAGTGATTAT TTCTGAGGCT
CAAGAAGCCA AACATCAAGC TATTCAAGAA ATTAATTATT CTGTCAATTC AGAAACTAAA
TCTGTTAAAA ATACCCAGAA ATTAAAATCC TCTGAAAAGC AGCCTACTAT GATTGCTGAT
GATTATTTTA AACTAGGAGA AAAACAATTT TATGATGGTC AATATAATCA AGCTTTAGCA
AATTTTGAAA AAGCTATTTC TCTTAATTCT TATTTAAGTG AAGCTTGGTT TAAGTCTGGT
AATGTATTTG TAAAATTGCA CCGTTATTCT GACGCTCTTG CTGCTTACGA TCATGCTATT
GCAATTCATT CTGATAGATT TGAATATTGG TTTAATCGTG GCAATGTATT TGTCAAGTTA
GAACGTTATT CTGAGGCATT AGCTTCCTAT GATAAAGCTC TTTCTCTTAA TCAAAATCAT
GTAGAAATTT GGCTAAACCG AGGTATTTTA TTCAGGAAAT TACAACGGTA TAATGAAGCA
GTTGTTTCAT ATCAAAAAGC TATTTTAATC CAGCCTAAAA ATGTTGATAT TTTGCATAAT
TTGGGTGCTT TATTAGGAAA GTTAGAGCGC TATGAAGAAG CAATCACTAC TTTTGACCAA
GCTCTGAAAA TTCAACCAAA TAAATTTGAA ATTTGGTATA ACCGAGGCAA TTTACTGGGA
AGGATACAAT CTTTTAACGA GGCAATTAAT TCTTATGACA AAGCACTAAA AATTAAACCA
GATAGGTATG AAATTTGGTA CAACAAAGGT GCTATTTTAT GGCAAATAGA AAAATATCAA
GAAGCAGTTA ATTGTTACGA CCAAGCAATT AATTTAATGC CAGATGATTA TGAAGTTTGG
CATAATAGAG GAGTAGCTTT AGGTGCTTTG GAAAAGTATC AGAAAGCAGT TAATTCTTAT
GATAAAGCAA TTAAAATTTA CCCCCAATGT TATCAAGCTT TTATCGGTAA AGCAGAAACA
TTATTGAAGT TAGAACAATA TGAGGAAGCT TTAAGTTCTT GTAATCATGC TATTGCTATT
AAAAAGGAAC GTTATGAAGG TTGGTTATGT CAAGGTCGGG TATTAGAAAA ATTGACAAGT
TATGAAGAAG CTTTGATGGC TTATGATCAA ACAATTGCTA TTAATGATAA TAGTTATGAA
GCTTGGGCAA GAAAAGGTAT GGTCTTAGAA AAAATTAAAC GCTATCAAGA AGCTTTAATG
TGTTATGACC GGGCTATTGC GATTAAACCG AATGATTCAG AATCTCAGCT AAAACGTCGT
AAATTATTGT CAGAATTACA AACAGAAGGA ATTTTCACTG AGGCAAATAA ATATAATTTA
CAACTCAATT TAGATGTTAG TAATAACCAA GATAAAAAAC TCAAAAAAAA TCAAAAAAAT
TATCCGTATC TTGCACAGAA GGGAAGAAAG AGCTAA
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| Protein sequence | MNLSKTAILT LTALSSQNLA TEAKVTPNTN PYFQTTAPEN INLTNSINVI TVPSTKSISP
PEILVSQAYN NLNLKTTLST PNIHQIKRTL NNSWLGKIVK FSAKNNYQFQ QFAEQMALKT
DLESEASLNL NPTLTLLNTL LLVATLLPPI TIGFFWLIRR LVIKELVGEV NKRLTKISQL
ELSLNQSQKL FTELESHIVT AKQSIDFLHQ EAKISKSSVE QIEVLKSQFL MQLQVIISEA
QEAKHQAIQE INYSVNSETK SVKNTQKLKS SEKQPTMIAD DYFKLGEKQF YDGQYNQALA
NFEKAISLNS YLSEAWFKSG NVFVKLHRYS DALAAYDHAI AIHSDRFEYW FNRGNVFVKL
ERYSEALASY DKALSLNQNH VEIWLNRGIL FRKLQRYNEA VVSYQKAILI QPKNVDILHN
LGALLGKLER YEEAITTFDQ ALKIQPNKFE IWYNRGNLLG RIQSFNEAIN SYDKALKIKP
DRYEIWYNKG AILWQIEKYQ EAVNCYDQAI NLMPDDYEVW HNRGVALGAL EKYQKAVNSY
DKAIKIYPQC YQAFIGKAET LLKLEQYEEA LSSCNHAIAI KKERYEGWLC QGRVLEKLTS
YEEALMAYDQ TIAINDNSYE AWARKGMVLE KIKRYQEALM CYDRAIAIKP NDSESQLKRR
KLLSELQTEG IFTEANKYNL QLNLDVSNNQ DKKLKKNQKN YPYLAQKGRK S
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