Gene Tery_2941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2941 
SymbolrpsT 
ID4245283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4572252 
End bp4572590 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content35% 
IMG OID638107981 
Product30S ribosomal protein S20 
Protein accessionYP_722578 
Protein GI113476517 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.205918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATA TCAAGTCTGC TATTAAACGT ATCCAAGTTG CTGAGCGCAA CCGTCTGCGG 
AACAAAAGTT ATAAATCTGC AGTTAGAACT TTGATGAAAA AATACTTCAC TACTGTTGAA
AAGTATGCCT CCAATCCCAC AGATGAATTA AAGATAGAAG TTGAACAGCA AATGTCAAAA
GCTTATAGTA AGATAGACAA AGCTGTGAAA CGTGGTGTTC TACATAAAAA TAATGGTTCT
CGTAAAAAGG CTAGGTTAGT GAGATTTTAT AAGAGACATT TAATTAGTCA AAAAAGTCAG
ACAGACTCTG GGGTTAAAGA TACTTCTGTA GCTTCCTAA
 
Protein sequence
MANIKSAIKR IQVAERNRLR NKSYKSAVRT LMKKYFTTVE KYASNPTDEL KIEVEQQMSK 
AYSKIDKAVK RGVLHKNNGS RKKARLVRFY KRHLISQKSQ TDSGVKDTSV AS