Gene Tery_2821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2821 
Symbol 
ID4245125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4385468 
End bp4386232 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content37% 
IMG OID638107873 
ProductHpcH/HpaI aldolase 
Protein accessionYP_722470 
Protein GI113476409 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.35672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.558191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAA ATCAACTCAA ACAAAAGCTA AAAAATGGTG AAGTTGTACT CGGACCTTTT 
ATGAATTGTG CTTACCCTGC ATTCGTAGAA ATTTGTGGTC TAGCAGGATT TGATTTTGTA
GTTATTGACC TAGAACACGG ACCTTTAAAT ATTCTAGTTG CAGAAGACCT TTGTCGTGCT
GCTGACTGTG TAGGTATTGC TCCTGTTGTC AGAGTCAGCA AAAACGATCC TGCACAAATT
CAACGGGCTC TTGATATTGG TAGTACGGGA GTACAAGTTC CACAAATAGA AACAATAAGT
GATGCAGAAA TAGTAGTACA AAGTGCTAAA TATAATCCTA TTGGTTGCCG TGGTTTATCA
TTTGGAACTC GTGCAGGACT TTACACTTCA GCAGGTAGCA ATATTACTAA TAAATTAAAT
GCAGAATCTT TAGTTGTAGT TCATGTAGAA GGTACAAAAG GCATCGAAAA TATGGAAGAA
ATTGTTAAAG TTCCTGAGAT TGATGTGATT TTTCTCGGTC CTTATGACTT ATCCCAGTCT
TTAGGTATTC CTGGTCAAGT TAATGATATT CGAGTAGTTG AGTTAATGCA AAAAGCGGTA
GAAATTATTC GGAGTTCTGG TAAAGTTGTC GGTACTTTTA CTAATAATTC TGAGGCAGCA
AAAAAATGGA TTGACTGTGG AGTGCAGTAT ATTGGATTAG GTATAGATGT GAGTATTTTT
CTCCAAGGTT GTCAAGCTTT AGTTAAAGGG GTAAGAGGTA AATAA
 
Protein sequence
MPKNQLKQKL KNGEVVLGPF MNCAYPAFVE ICGLAGFDFV VIDLEHGPLN ILVAEDLCRA 
ADCVGIAPVV RVSKNDPAQI QRALDIGSTG VQVPQIETIS DAEIVVQSAK YNPIGCRGLS
FGTRAGLYTS AGSNITNKLN AESLVVVHVE GTKGIENMEE IVKVPEIDVI FLGPYDLSQS
LGIPGQVNDI RVVELMQKAV EIIRSSGKVV GTFTNNSEAA KKWIDCGVQY IGLGIDVSIF
LQGCQALVKG VRGK