| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2805 |
|---|
| Symbol | |
|---|
| ID | 4245339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4349528 |
|---|
| End bp | 4350673 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638107857 |
|---|
| Product | spermidine/putrescine ABC transporter ATPase subunit |
|---|
| Protein accession | YP_722454 |
|---|
| Protein GI | 113476393 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.593662 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAA CTGCACTGAA TATTGGGACG ACCCTAAATA AAACCAAAAA TGACGTTGAA
CTGCGTAAAG TATTCAAAGT ATTTGAAGGC CATACAGCAG TAAAGGGCGT GGACTTCAAT
ATTCGTCAAG GAGAATTTTT TAGTATTCTA GGACCTTCTG GGTGTGGTAA AACTACCACA
TTACGTTTAA TAGCTGGATT TGAAACCCCA TCGGCAGGTG AAATAATTAT TCGAGGCCAA
TCTATGAGTC AAACTCCTGC TTACCGTCGT CCAGTAAATA CTGTTTTTCA AAGCTACGCT
TTATTTAATC ATTTGAGCGT TAAAGATAAT ATCGCTTTTG GACTACGAAT AAAACGTTTA
GGAAAAACTG AAACTGAGGA AAAAGTAGCA CAAGCTTTGC AGTTGGTCAA AATGGAGAAA
TTTGCTGATC GCTACCCTAA TCAAATATCT GGTGGACAAC AACAACGGGT GGCTTTAGCA
AGGGCTTTAG TAAATCGTCC AGCAGTATTA TTATTAGATG AACCCCTGGG GGCTTTAGAC
TTAAAGCTAC GCAAACAAAT GCAAATGGAA TTGTCCAATA TACATAAAGA TTTGGGGGTC
ACATTTGTAA TGGTAACTCA CGACCAACAA GAGGCTATGA GTATGTCTGA CCGCATTGCT
GTGATGCACG AGGGTAGAAT AGAACAAATA GGCTCTCCTC AAGAAATTTA TGAGTGTCCT
GAAAGTCCAT TTGTCGCAGA TTTTATTGGA GATACAAATT TATTTCAAGG TTGTGTCGAA
TATAATAATA ATTCCAGTCT AGTTGTTAAG ACAGATAGTG GTCTGAATAT TTCTGCAGAA
TACAAAAAAG TAAATGGAAA AAACGGAGAA ATCTATGGAG GTACTTCAGT AGTACTAAGT
GTGCGACCAG AAAAAGTTAA TCTCAGTCTA TATCCTCCAG ATGTATCAGA AAATTGTTTT
GAAGGTAGGT TGAGGAATGT AATGTATATG GGAACTCATG TACATTATCA AGTAAATCTG
TTGTCCGGTG ATCAGATGAT GGTAAGGCAA CCAAATACAG AACGAACTTT GCCTAACTTA
GATACTCCTA TGTATGTCTA CTGGTCAAAA CAAAATTGTT TAGCTTTAAG TGAATCAAAA
TCATAA
|
|---|
| Protein sequence | MTQTALNIGT TLNKTKNDVE LRKVFKVFEG HTAVKGVDFN IRQGEFFSIL GPSGCGKTTT
LRLIAGFETP SAGEIIIRGQ SMSQTPAYRR PVNTVFQSYA LFNHLSVKDN IAFGLRIKRL
GKTETEEKVA QALQLVKMEK FADRYPNQIS GGQQQRVALA RALVNRPAVL LLDEPLGALD
LKLRKQMQME LSNIHKDLGV TFVMVTHDQQ EAMSMSDRIA VMHEGRIEQI GSPQEIYECP
ESPFVADFIG DTNLFQGCVE YNNNSSLVVK TDSGLNISAE YKKVNGKNGE IYGGTSVVLS
VRPEKVNLSL YPPDVSENCF EGRLRNVMYM GTHVHYQVNL LSGDQMMVRQ PNTERTLPNL
DTPMYVYWSK QNCLALSESK S
|
|---|
| |