Gene Tery_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2618 
Symbol 
ID4244686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4043562 
End bp4045433 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content46% 
IMG OID638107687 
ProductGUN4-like 
Protein accessionYP_722286 
Protein GI113476225 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000189308 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.347807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCTC TTTTTTCTAT CCTTGGTCTA ACTTTCCTCT CTGTCATTCT GACAAACTGT 
TCCTTATCTC CAGAAAAAAT AGCTTCTCGA CTAAAACCTA GTATTGTCAA ACTATCTTAT
AAAAATAAAC CCGGACATGG AACTGGTTTT TTTGTGCCTG GAGAACTAGG GGTCTGTACT
GTACTGACTG CAGCTCATGT TGTGGACGAG GAGGGAAAGG TAAGGTTACG CACTGAAAAA
GATGGAAAAT TCTGGGATGC GGCTACAGTA AAAATATTTC CTCGTACTAT AGATATGGCT
TTGGTGACTT TTAAGCCAGA GACGGAAAAA TGTAATTATC GGGCACTGAA AATAGGTAAC
TCAGATAGTC TCAGGATAGG TAGTTCTATT TTTATTTATG GTTTTCCTCG TCGGGGTGGG
GCTCTAGTTC CCCAGTTTGT TGATGGTAAG GTCTCAGCTT TGGATAGGTT GGCTCGGGGT
TATGGGGTTT CTTATAGTAC TTTGACTGTG GGTGGAATGA GTGGAGCTCC TGTTGTGGAT
GGGAGGGGTA GGGTTGTGGC TGTACATGGA ATGAGCGATG TTGAAATAGT TCAAAGTTTG
GCTTCACAAC AAGCAGGTTT GTCTGAGGAT GAACGGCTTT TGAGTCAGCA GGCTCAGGAA
AGTTTGAGGG CTGCTGGTGT TCAACGTTTG ACTTTTTCTT GGGGTATACC TATTACTTTT
TTTCGGGAGT CTAAGTTTTA TTATTCTCAG GTTTCTGGGT TGAGTTTGTG GATGTTGTTT
TATGGTGGGG CGGTGTTTGG TGGTGGTGTT GTTTATTTTG GGTTGAGGTA TTTTCAAGCT
CCACGGGTTT CAGGAGAAAG ACAAGGGGAC TGGGAAAGGC AACTTAAGAA TGAAAAACGG
AGGCGAGAGG AGGTTGAGGG CAGGTTGAGT TCTCTGGAAA GTTCTCGGGC TCAGGCACGG
CAGGAGTTGG AAAGGCAAAT AGAATGGGAA AGGGGGAAAA GACGGGAGTT TGAGGCACTG
CTTAAGAATG AAAAACGGGG GCGAGAGGAG GTTGAGGGCA GGTTGAGTTC TCTGGAAAGT
TCTGGGGCTC AGGCACAGCA GGAGTTGGAA AGGCAACTAG AATGGGAAAG GGGGAAAAGA
CGGGAGTTTG AGGCACTGCT TAAGAATGAA AAACGGGGAC GAGAGGAGGT TGAGGGCAGG
TTGAGTTCTC TGGAAAGTTC TGGGGCTCAG GCACGGCAGG AGTTGGAAAG GCAACTAGAA
TGGGAAAGAG GGAAAAGACA GGAGCTTGAG GCACTGCTGC AAAGTCAAGG GGAGGTTCAG
CCTCGGGTTG TTGAGCCTTT GTCTTCTGGT GATGTGCCTC TGGTTTCTGC AGTTGGGGTT
AGTTATTCTA GGTTGCGTGA TCTATTGGTG GCTAAAAAGT GGAGGGAAGC AGACCAAGAA
ACATACAAAA GAATGTTAGA AGTTGCGGGC AGGGAGTCCG AAGGATGGTT TAGAGGCTCG
GATATAGAAA ATTTTCCCTG CCAAGATTTA GCCACGATTG ACAAACTATG GGTAAAGTAT
AGTAGTGGTA AGTTTGGTTT TTCTGTTCAG AAGCAAATTT ATCAGAGTTT GGGTGGTACG
AATGAATGGG ACGAAAAAGT CTGGACAGCC TTCAGTGATC AAGTTGGATG GCGAAAAAGG
GGTCGTTGGT TGAATTATGA TGAGATTTTC GACGAGACAT CGCATTGTGT GGGCCTCCTG
CCAGGCATCA CACATTGTGA CCTCGGCCTG ACCGGTGGGC CTGGTCCTTT TGACCTTATT
GACTCTTTAA GGATATTAAA AATGGTGGCC ATTATTTTTG CTATTACTAT TTTCTCGCGC
AGAGACTTGT AG
 
Protein sequence
MKSLFSILGL TFLSVILTNC SLSPEKIASR LKPSIVKLSY KNKPGHGTGF FVPGELGVCT 
VLTAAHVVDE EGKVRLRTEK DGKFWDAATV KIFPRTIDMA LVTFKPETEK CNYRALKIGN
SDSLRIGSSI FIYGFPRRGG ALVPQFVDGK VSALDRLARG YGVSYSTLTV GGMSGAPVVD
GRGRVVAVHG MSDVEIVQSL ASQQAGLSED ERLLSQQAQE SLRAAGVQRL TFSWGIPITF
FRESKFYYSQ VSGLSLWMLF YGGAVFGGGV VYFGLRYFQA PRVSGERQGD WERQLKNEKR
RREEVEGRLS SLESSRAQAR QELERQIEWE RGKRREFEAL LKNEKRGREE VEGRLSSLES
SGAQAQQELE RQLEWERGKR REFEALLKNE KRGREEVEGR LSSLESSGAQ ARQELERQLE
WERGKRQELE ALLQSQGEVQ PRVVEPLSSG DVPLVSAVGV SYSRLRDLLV AKKWREADQE
TYKRMLEVAG RESEGWFRGS DIENFPCQDL ATIDKLWVKY SSGKFGFSVQ KQIYQSLGGT
NEWDEKVWTA FSDQVGWRKR GRWLNYDEIF DETSHCVGLL PGITHCDLGL TGGPGPFDLI
DSLRILKMVA IIFAITIFSR RDL