Gene Tery_2608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2608 
Symbol 
ID4244676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4026713 
End bp4028083 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content37% 
IMG OID638107677 
ProductRDD domain-containing protein 
Protein accessionYP_722276 
Protein GI113476215 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.107491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTTTT TACTATTAAT TTACTTGACT TTGGGTAAGC AAGAAATAAA TGAAAATACT 
TCGGTAAAAT CCTCTATTTT TCTAGTTTTA AATACTGTAT TAGGTTGGTT ATATTTTGCT
ATATTGGAAA GTTCTCAAAT ACAAGGAACT TTAGGTAAAC AGATAGTTGG AATTTCTGTA
ACAGACTTAC GGGGAAATAA AATTTCTTTT GGCAAAGCAA CAGCAAGATA TTTCGGCAAG
TCATTTTTTC TTGTAGTTTG GATAGCTGCT ACAATAGTGG CCATAATGGG TGAAGGGACA
GGGTCTACAG ATTCACCATA CTTGATACTA GCTGGAATAC TGTTTATTCT GGGATTAATT
GTATTAGTTG TTGGTTATCT GATGGCTGCT TTTACCCCAG AAAAACAGGC ACTCCATGAC
ATTATGGCAA GGTGTTTAGT GGAGAGAGCA AGTGGTCAAC CTAGAGCTAT TCCTTGGAAG
TCTTTAGTTG CTCTAGCCAT AGCAGGGTTT TTCTCTAGTA AAATTTTAGC CATGATTCCT
GAGGCACCCA ATGATCCAAA TAACGATACA ATATCGGAAC CAACTCCAAC AGAAACTTCA
CCTCCCACTC GACCAAGGAC AAAATATCCA AAGGTATCCA CCAAAGAAAA CAGAATTTTT
GGCCCTCTTA TTGAACCAGA TGACAGGCTA AAAGAAGCCT TTAAAGGAGT ATGGAAATTA
AGCTACAGTG TTGGCTTTGT TGTCCATGAA AGCCAGTTAT CAATGACAGG ACCTTCAGGA
GTCATGTTCA CTCAGTTTTT TGATAGTGAT ATTAACCAAA CTAAGACCAT CCTACAAAAG
ATTGAGCTTT TGTCTTCTGC TAAAGGCCTA GTTTTATTAG GTAGTGATCC GACCAATTTA
GATTCTGGAG AAATAGACTC CGCCTACTCA GCGGATAATT TTCGCGTAGC ACAAAGACCA
GATGGTACTT TTGAGTTTCG TAACTATTCT CTCAGTGATG ATGGCTCTAT ATTTGAGTCA
CCAGTGGAAG CTGAATTTAG TGGCTATCCA AAACTAGGTG TTCAAATGGC CGAGCTGACA
CGAGAAGTTA AACAGAAATT AAATACAGAA ATTGGGAGCA ACGTCATTAC TGAAGAGCAA
GGTGTTTTAG TTATTAAAGT TTTTGATGAT TCTCCAGCAG AAAAAGCTAA TATTAGGCCA
GGAGATGTAC TTCAAGAAGT TAAGAATAGG ACAGTTACTT CTCCGAGTCA AGTCCAGGAA
ATTGTCCAAT CTTCATATTT GTTTTTGCCT ATTGATATAC AATTGAATCG TAGCGGTGAA
AACATAAATT TGAGTGTACA ACCTGAATGT TGTATGACTC AGGAAGAGTA A
 
Protein sequence
MVFLLLIYLT LGKQEINENT SVKSSIFLVL NTVLGWLYFA ILESSQIQGT LGKQIVGISV 
TDLRGNKISF GKATARYFGK SFFLVVWIAA TIVAIMGEGT GSTDSPYLIL AGILFILGLI
VLVVGYLMAA FTPEKQALHD IMARCLVERA SGQPRAIPWK SLVALAIAGF FSSKILAMIP
EAPNDPNNDT ISEPTPTETS PPTRPRTKYP KVSTKENRIF GPLIEPDDRL KEAFKGVWKL
SYSVGFVVHE SQLSMTGPSG VMFTQFFDSD INQTKTILQK IELLSSAKGL VLLGSDPTNL
DSGEIDSAYS ADNFRVAQRP DGTFEFRNYS LSDDGSIFES PVEAEFSGYP KLGVQMAELT
REVKQKLNTE IGSNVITEEQ GVLVIKVFDD SPAEKANIRP GDVLQEVKNR TVTSPSQVQE
IVQSSYLFLP IDIQLNRSGE NINLSVQPEC CMTQEE