Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2608 |
Symbol | |
ID | 4244676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4026713 |
End bp | 4028083 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638107677 |
Product | RDD domain-containing protein |
Protein accession | YP_722276 |
Protein GI | 113476215 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.107491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTTTTT TACTATTAAT TTACTTGACT TTGGGTAAGC AAGAAATAAA TGAAAATACT TCGGTAAAAT CCTCTATTTT TCTAGTTTTA AATACTGTAT TAGGTTGGTT ATATTTTGCT ATATTGGAAA GTTCTCAAAT ACAAGGAACT TTAGGTAAAC AGATAGTTGG AATTTCTGTA ACAGACTTAC GGGGAAATAA AATTTCTTTT GGCAAAGCAA CAGCAAGATA TTTCGGCAAG TCATTTTTTC TTGTAGTTTG GATAGCTGCT ACAATAGTGG CCATAATGGG TGAAGGGACA GGGTCTACAG ATTCACCATA CTTGATACTA GCTGGAATAC TGTTTATTCT GGGATTAATT GTATTAGTTG TTGGTTATCT GATGGCTGCT TTTACCCCAG AAAAACAGGC ACTCCATGAC ATTATGGCAA GGTGTTTAGT GGAGAGAGCA AGTGGTCAAC CTAGAGCTAT TCCTTGGAAG TCTTTAGTTG CTCTAGCCAT AGCAGGGTTT TTCTCTAGTA AAATTTTAGC CATGATTCCT GAGGCACCCA ATGATCCAAA TAACGATACA ATATCGGAAC CAACTCCAAC AGAAACTTCA CCTCCCACTC GACCAAGGAC AAAATATCCA AAGGTATCCA CCAAAGAAAA CAGAATTTTT GGCCCTCTTA TTGAACCAGA TGACAGGCTA AAAGAAGCCT TTAAAGGAGT ATGGAAATTA AGCTACAGTG TTGGCTTTGT TGTCCATGAA AGCCAGTTAT CAATGACAGG ACCTTCAGGA GTCATGTTCA CTCAGTTTTT TGATAGTGAT ATTAACCAAA CTAAGACCAT CCTACAAAAG ATTGAGCTTT TGTCTTCTGC TAAAGGCCTA GTTTTATTAG GTAGTGATCC GACCAATTTA GATTCTGGAG AAATAGACTC CGCCTACTCA GCGGATAATT TTCGCGTAGC ACAAAGACCA GATGGTACTT TTGAGTTTCG TAACTATTCT CTCAGTGATG ATGGCTCTAT ATTTGAGTCA CCAGTGGAAG CTGAATTTAG TGGCTATCCA AAACTAGGTG TTCAAATGGC CGAGCTGACA CGAGAAGTTA AACAGAAATT AAATACAGAA ATTGGGAGCA ACGTCATTAC TGAAGAGCAA GGTGTTTTAG TTATTAAAGT TTTTGATGAT TCTCCAGCAG AAAAAGCTAA TATTAGGCCA GGAGATGTAC TTCAAGAAGT TAAGAATAGG ACAGTTACTT CTCCGAGTCA AGTCCAGGAA ATTGTCCAAT CTTCATATTT GTTTTTGCCT ATTGATATAC AATTGAATCG TAGCGGTGAA AACATAAATT TGAGTGTACA ACCTGAATGT TGTATGACTC AGGAAGAGTA A
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Protein sequence | MVFLLLIYLT LGKQEINENT SVKSSIFLVL NTVLGWLYFA ILESSQIQGT LGKQIVGISV TDLRGNKISF GKATARYFGK SFFLVVWIAA TIVAIMGEGT GSTDSPYLIL AGILFILGLI VLVVGYLMAA FTPEKQALHD IMARCLVERA SGQPRAIPWK SLVALAIAGF FSSKILAMIP EAPNDPNNDT ISEPTPTETS PPTRPRTKYP KVSTKENRIF GPLIEPDDRL KEAFKGVWKL SYSVGFVVHE SQLSMTGPSG VMFTQFFDSD INQTKTILQK IELLSSAKGL VLLGSDPTNL DSGEIDSAYS ADNFRVAQRP DGTFEFRNYS LSDDGSIFES PVEAEFSGYP KLGVQMAELT REVKQKLNTE IGSNVITEEQ GVLVIKVFDD SPAEKANIRP GDVLQEVKNR TVTSPSQVQE IVQSSYLFLP IDIQLNRSGE NINLSVQPEC CMTQEE
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