Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2435 |
Symbol | |
ID | 4244619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3751594 |
End bp | 3753021 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638107523 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_722123 |
Protein GI | 113476062 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.588454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTATCAA TCCAATCTGT AGAAGTAAAC TCTGGACTTC AGTATTTGCC AAAATCAACA GACTCTGTTG GACAAAGTTC GCCCAATCAA GAACTTTTAC CACTTACTGC TAAAGTCAAC AACTTAGACC ATTTAGAAAT TGGAGGTTGG GATATCCCAG CATTAGTAGA AAAATTTGGC TCACCTCTAT ATATTATAGA CGAATATACT CTCCGAACAG CTTGTCGCCA ATATAGAGAT GGACTTCAAA AGTACTATCC TGGAGAATCT TTAGTACTTT ATGCTTCCAA AGCTTGGAGT AGTCTAGCAG TATGTGCCTT ATGTGCCTCT GAAGGCTTAG GTATAGATGT TGTATCTGGA GGAGAACTAT ATACAGCTAT AGAAGCAGGT GTTAATCCTG ACAAAATATA TTTTCATGGC AATAATAAAT CTCTGGCAGA ATTAACTTTT GCCATTGAAA CAGATTGTAT AATTGTTGTA GATAACTGGC TAGAATTAGA AACATTAGCA GGTTTAAAGA AGCAACAAAA AGATCAGGTA CAAAATCCGA CAAAAATAAT GGTAAGATTT ACACCTGGTA TTGAATGCCA TACCCACGAA TATATTCGTA CAGGTCATCT AGATAGCAAG TTTGGATTTG ATCCAGGTCA ACTAAATGAT GTTTTTGCCT TCATAAGTAA AGAAGAATTA CTACTACTTA TTGGTGTTCA TGCTCATATA GGTTCTCAGA TTTTTGAAGT TCAACCTCAT CAAGATTTAG TGACTGTTAT GGTAGATACA ATGACAACTG CCATGTCACA TAACTTGCCA ATCAAAGAAA TTAATATTGG TGGTGGTTTA GGAATCCGTT ATACTGAAAC AGATGACCCC CCTAGTATTG AAACTTGGGT TCATAAGGTA AGCACAGCAA TGGTAGATGT TTGTAAAGCT AGACAGTTAC CACTTCCTAA ACTATTATGT GAACCGGGAC GCTCAATAAT TGGGCCTGCC TGTATAACAG CTTATACTAT AGGGTCTCAA AAAGAAATTC CTGAAATTAG AACTTATATA TCTGTAGATG GGGGAATGTC AGATAATCCT CGACCAATTA CTTATCAATC AGTTTATCGA GCAATTGTAG CTAATAGATT ATCTAAGCCA AGCACAGAAG TAGTTACTAT TGCTGGTAAA CATTGTGAGT CTGGTGATAT TTTGATCAAG AATGCTACCT TACCAGTAAC TCAACCAGGA GATTGTTTTG TAGTTATGGC TACAGGTGCT TACAATTATA GTATGGCTTC TAACTATAAT CGTTTGCCAC GCCCAGCAGC AGTTTTGGTT GCTGAAAAGG AGGTTAATAT AATTTTACAG AGGGAAACTT ATCAAGATTT ACTTAGTAAA GATACTTTAC CAGAACGAAT AGCAACACTT CCAAAGTTAA CAACATGA
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Protein sequence | MVSIQSVEVN SGLQYLPKST DSVGQSSPNQ ELLPLTAKVN NLDHLEIGGW DIPALVEKFG SPLYIIDEYT LRTACRQYRD GLQKYYPGES LVLYASKAWS SLAVCALCAS EGLGIDVVSG GELYTAIEAG VNPDKIYFHG NNKSLAELTF AIETDCIIVV DNWLELETLA GLKKQQKDQV QNPTKIMVRF TPGIECHTHE YIRTGHLDSK FGFDPGQLND VFAFISKEEL LLLIGVHAHI GSQIFEVQPH QDLVTVMVDT MTTAMSHNLP IKEINIGGGL GIRYTETDDP PSIETWVHKV STAMVDVCKA RQLPLPKLLC EPGRSIIGPA CITAYTIGSQ KEIPEIRTYI SVDGGMSDNP RPITYQSVYR AIVANRLSKP STEVVTIAGK HCESGDILIK NATLPVTQPG DCFVVMATGA YNYSMASNYN RLPRPAAVLV AEKEVNIILQ RETYQDLLSK DTLPERIATL PKLTT
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