| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2319 |
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| Symbol | truB |
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| ID | 4245201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 3592521 |
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| End bp | 3593426 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638107415 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_722015 |
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| Protein GI | 113475954 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.163994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00744574 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAAGGAT TTCTCAATCT TAACAAACCA TCGGGCATGA CTTCCCATGA CTGTGTAGCA
AAAGTACGAA AGCTACTACG TCTCAAGCGT GTTGGACATG GAGGAACTCT TGACCCTGCT
GCTACTGGTG TTTTACCTAT TGCAGTGGGA AAAGCAACCA GGTTATTACA GTTTCTACCT
TCAGAAAAAG CTTATTTTGG TACAGTTAAA TTTGGTATAA TTACTACTAC TGATGACTTA
GAGGGAGAAA TTGTTCAATC TGCACCAGTA CCAGAATTAA TGTTGTCTGA TATTGAAAAA
GTATTACCAA ATTTCCTAGG TAAAATAGAG CAAGTGCCAC CTAGTTATAG TGCAATACAG
GTAGAAGGAA AGCGACTTTA TGATTTAGCG CGTCAGGGAA AAACAGTTGA GGTTCCTACC
CGTATTGTTG AAGTGTTTAA TATAAAAATT CTTGACTGGC GAAGTGGAGA TTTTCCAGAA
GTAGACTTGG CGATCGCTTG TGGTACAGGA ACTTATATTC GAGCGATCGC TCGCGATCTA
GGTAGAACTT TAAGTATTGG CGGAACTTTA GCTGCTTTAA CCAGAATAGA AAGTAGTGGT
TTTTCTGAGG AAAATAGTCT CACTTTTGCA GAAGTGGAAA ATCAACTACA GGAAAATAAG
TTTAGTCTTT TATCTATAGA AATAGCATTG GCACATTTAC CAGTGATAGT CTTAATTACT
GAAGATGCAA AAAGATGGTG TCAAGGTCAA CGTTTACCCT ATCAAGTAAA ATGGCAGATA
GAAACTAAAA AAGCTGAGCA CTATTTCCGA GTATACAATT ATAAAGGTGA CTTTCTAGGT
ATTGGGCAGT TAATCAAATC TGAAGAAAAT TTATTATTAG CACCTCAAGT TGTAATTAGT
AATTAG
|
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| Protein sequence | MQGFLNLNKP SGMTSHDCVA KVRKLLRLKR VGHGGTLDPA ATGVLPIAVG KATRLLQFLP
SEKAYFGTVK FGIITTTDDL EGEIVQSAPV PELMLSDIEK VLPNFLGKIE QVPPSYSAIQ
VEGKRLYDLA RQGKTVEVPT RIVEVFNIKI LDWRSGDFPE VDLAIACGTG TYIRAIARDL
GRTLSIGGTL AALTRIESSG FSEENSLTFA EVENQLQENK FSLLSIEIAL AHLPVIVLIT
EDAKRWCQGQ RLPYQVKWQI ETKKAEHYFR VYNYKGDFLG IGQLIKSEEN LLLAPQVVIS
N
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