Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2239 |
Symbol | |
ID | 4243332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3485910 |
End bp | 3486572 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638107341 |
Product | HEAT repeat-containing PBS lyase |
Protein accession | YP_721941 |
Protein GI | 113475880 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.5711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTTA ACCCAAATTC AGTTAAGCAA CTACTGATAT CCGAAGAACT AGGCGATCGC TTGCGAGGAG TTAATAAATT ACGTCAAATA GAACCTGCGA TCGCCTTTGA ATTAATTCAA ATTCCGATCA AGGATAAAAA TACTCGTGTT AGGTACGCTG CCGTCAGCCA AATGTCAAGC TTGGGAAAGC AAAACTTAAC AATATCCCAA GAAATATTGT GTGAGCGTCT CTTCAAAGAT AAAGAAGCAG ATGTGCAAGC AGCAGCAGCA GATGCTATCG GAGCATTAAA AATAACTCAA GCTTTTGATG ACCTAGTGCG GGTATACCAA AATACTTCAG AATGGTTAGT AAAACTCAGT ATAGTTGCGG CAATAGGAGA AATGGGAGAA CCAAAAGCTT TTTCTTTACT TGAGGATGCT CTCAATTCAG AGAATGAATT AATACAGACT ATTGCCATTA GCGCTCTAGG GGAACTAGGA AATTTAGAAG CCATTCCTTT ACTCAAACCC TTTGCTGTCC ACAGTGACTG GCAAATACGC TATAGAGTTT TACAGGCCTT AGAGAGGTTA GGAACCCCAG AAGCAAAAGA GATAATAGCA CAGTTGGCTG AGGATGAAGT TGAACAGGTT GCTCAGGAGG CCAAGCTATC TCAGAGCAGG TAA
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Protein sequence | MSVNPNSVKQ LLISEELGDR LRGVNKLRQI EPAIAFELIQ IPIKDKNTRV RYAAVSQMSS LGKQNLTISQ EILCERLFKD KEADVQAAAA DAIGALKITQ AFDDLVRVYQ NTSEWLVKLS IVAAIGEMGE PKAFSLLEDA LNSENELIQT IAISALGELG NLEAIPLLKP FAVHSDWQIR YRVLQALERL GTPEAKEIIA QLAEDEVEQV AQEAKLSQSR
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