Gene Tery_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2239 
Symbol 
ID4243332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3485910 
End bp3486572 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content41% 
IMG OID638107341 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_721941 
Protein GI113475880 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.5711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTA ACCCAAATTC AGTTAAGCAA CTACTGATAT CCGAAGAACT AGGCGATCGC 
TTGCGAGGAG TTAATAAATT ACGTCAAATA GAACCTGCGA TCGCCTTTGA ATTAATTCAA
ATTCCGATCA AGGATAAAAA TACTCGTGTT AGGTACGCTG CCGTCAGCCA AATGTCAAGC
TTGGGAAAGC AAAACTTAAC AATATCCCAA GAAATATTGT GTGAGCGTCT CTTCAAAGAT
AAAGAAGCAG ATGTGCAAGC AGCAGCAGCA GATGCTATCG GAGCATTAAA AATAACTCAA
GCTTTTGATG ACCTAGTGCG GGTATACCAA AATACTTCAG AATGGTTAGT AAAACTCAGT
ATAGTTGCGG CAATAGGAGA AATGGGAGAA CCAAAAGCTT TTTCTTTACT TGAGGATGCT
CTCAATTCAG AGAATGAATT AATACAGACT ATTGCCATTA GCGCTCTAGG GGAACTAGGA
AATTTAGAAG CCATTCCTTT ACTCAAACCC TTTGCTGTCC ACAGTGACTG GCAAATACGC
TATAGAGTTT TACAGGCCTT AGAGAGGTTA GGAACCCCAG AAGCAAAAGA GATAATAGCA
CAGTTGGCTG AGGATGAAGT TGAACAGGTT GCTCAGGAGG CCAAGCTATC TCAGAGCAGG
TAA
 
Protein sequence
MSVNPNSVKQ LLISEELGDR LRGVNKLRQI EPAIAFELIQ IPIKDKNTRV RYAAVSQMSS 
LGKQNLTISQ EILCERLFKD KEADVQAAAA DAIGALKITQ AFDDLVRVYQ NTSEWLVKLS
IVAAIGEMGE PKAFSLLEDA LNSENELIQT IAISALGELG NLEAIPLLKP FAVHSDWQIR
YRVLQALERL GTPEAKEIIA QLAEDEVEQV AQEAKLSQSR